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P3_protein
Euk-VirMoroccan_watermelon_mosaic_virus
P3_protein__YP_001552424__Moroccan_watermelon_mosaic_virus__167129
Identity
- Accession:
- YP_001552424 ↗
- Protein ID:
- P3_protein
- Kingdom:
- euk
Quality
76.8
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Moroccan_watermelon_mosaic_virus
TaxID: 167129
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-183
Domain cluster:
rep: P3__YP_009509100__Daphne_virus_Y__282712__D3-191
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13608.11 best | Potyvirid-P3 | 83.5 | 2.40e-23 | 97.1% | 36.3% |
D2
medium
residues 205-257
D3
medium
residues 258-347
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.71 | 48.0 | 4.23e-01 | 78.9% | 48.1% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 46.0 | 3.95e-01 | 72.2% | 77.6% |
| 3m71A00 | 1.50.10.150 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Voltage-dependent anion channel | 0.57 | 40.0 | 2.74e-01 | 73.3% | 26.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5053119 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 50.0 | 4.51e-01 | 70.0% | 51.7% |
| 3234723 | 148.1.1.18 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-S | 0.71 | 48.0 | 4.70e-01 | 72.2% | 65.3% |
| 4978695 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.69 | 54.0 | 4.20e-01 | 84.4% | 68.7% |
| 3345589 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.66 | 57.0 | 4.53e-01 | 96.7% | 51.1% |
| 1297277 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.66 | 58.0 | 4.64e-01 | 97.8% | 53.6% |
| 3481731 | 148.1.1.18 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-S | 0.66 | 44.0 | 4.39e-01 | 70.0% | 65.3% |
| 223712 | 3614.1.1.1 ↗ | alpha arrays › T4 RNA ligase › T4 RNA ligase › T4 RNA ligase (Rnl1) C-terminal domain › T4_Rnl1_C | 0.65 | 49.0 | 4.46e-01 | 86.7% | 59.0% |
| 4612240 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 50.0 | 3.98e-01 | 81.1% | 48.0% |
| 5044635 | 2.21.1.3 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 | 0.63 | 47.0 | 3.77e-01 | 78.9% | 50.9% |
| 5039745 | 2003.1.1.36 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N | 0.59 | 40.0 | 3.06e-01 | 72.2% | 28.0% |
| 4310744 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.52 | 36.0 | 3.04e-01 | 71.1% | 42.5% |