P3_protein

Euk-Vir

Pokeweed_mosaic_virus

P3_protein__YP_008719790__Pokeweed_mosaic_virus__1220025

Identity

76.2 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Pokeweed_mosaic_virus

TaxID: 1220025

View cluster (66 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-186

PDB

Domain cluster: rep: P3__YP_009509100__Daphne_virus_Y__282712__D3-191

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13608.11 best	Potyvirid-P3	112.3	4.40e-32	91.9%	34.7%

D2 medium residues 258-346

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3pe0A01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.63	40.0	3.89e-01	76.4%	56.4%
3lqhA02	1.20.920.10	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like	0.55	38.0	3.63e-01	71.9%	99.1%
1werA01	1.10.506.10	Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1	0.54	38.0	3.13e-01	75.3%	75.0%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4203130	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.72	61.0	5.61e-01	92.1%	83.5%
None	—		0.70	55.0	3.98e-01	85.4%	31.0%
3773705	3990.1.1.0 ↗	few secondary structure elements › Zinc finger domain in TOPLESS related protein 2 (TPR2) › Zinc finger domain in TOPLESS related protein 2 (TPR2) › Zinc finger domain in TOPLESS related protein 2 (TPR2)	0.53	38.0	3.90e-01	75.3%	78.8%