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P3_protein
Euk-VirThunberg_fritillary_mosaic_virus
P3_protein__YP_254716__Thunberg_fritillary_mosaic_virus__299200
Identity
- Accession:
- YP_254716 ↗
- Protein ID:
- P3_protein
- Kingdom:
- euk
Quality
80.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Thunberg_fritillary_mosaic_virus
TaxID: 299200
Cluster
View cluster (66 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-195
Domain cluster:
rep: P3__YP_009509100__Daphne_virus_Y__282712__D3-191
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13608.11 best | Potyvirid-P3 | 95.8 | 4.50e-27 | 88.2% | 33.9% |
D2
medium
residues 255-349
Domain cluster:
rep: third_protein__YP_008320584__Habenaria_mosaic_virus__1324128__D254-348
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tuuA00 | 1.20.140.80 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP | 0.76 | 54.0 | 4.69e-01 | 73.7% | 100.0% |
| 6muwK00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 38.0 | 2.98e-01 | 74.7% | 84.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3234723 | 148.1.1.18 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-S | 0.69 | 46.0 | 4.61e-01 | 71.6% | 67.4% |
| 3788874 | 148.1.1.18 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-S | 0.67 | 43.0 | 4.12e-01 | 71.6% | 57.3% |
| 3481731 | 148.1.1.18 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-S | 0.66 | 43.0 | 4.34e-01 | 70.5% | 66.3% |
| 4984034 | 873.1.1.20 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6125 | 0.63 | 44.0 | 3.63e-01 | 71.6% | 86.7% |
| None | — | 0.62 | 48.0 | 3.54e-01 | 85.3% | 30.8% | |
| 4982207 | 5076.2.1.18 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF6159 | 0.59 | 42.0 | 3.13e-01 | 73.7% | 47.4% |
| 5070203 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.58 | 51.0 | 3.30e-01 | 91.6% | 72.4% |
| 3329805 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.56 | 43.0 | 3.62e-01 | 81.1% | 61.3% |
| 5059074 | 5076.2.1.18 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF6159 | 0.56 | 41.0 | 3.03e-01 | 75.8% | 57.7% |
| 3192990 | 192.15.1.216 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF7719 | 0.52 | 38.0 | 3.20e-01 | 75.8% | 57.6% |