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P45
Euk-VirLymantria_xylina_nucleopolyhedrovirus
P45__YP_003517840__Lymantria_xylina_nucleopolyhedrovirus__166921
Identity
- Accession:
- YP_003517840 ↗
- Protein ID:
- P45
- Kingdom:
- euk
Quality
84.1
mean pLDDT
Taxonomy
TaxID: 166921
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-208
Domain cluster:
rep: hypothetical_protein__YP_667882__Neodiprion_abietis_NPV__204507__D58-231
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04878.20 best | Baculo_p48 | 291.5 | 1.30e-86 | 97.5% | 54.4% |
D2
high
residues 212-357
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04878.20 best | Baculo_p48 | 155.7 | 2.50e-45 | 100.0% | 34.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qgnA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.62 | 27.0 | 3.45e-01 | 83.6% | 68.3% |
| 6tblB01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 29.0 | 3.25e-01 | 78.1% | 61.3% |
| 3b9wA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.54 | 39.0 | 3.03e-01 | 74.7% | 73.5% |
| 3rrcB01 | 1.20.1310.20 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain | 0.51 | 38.0 | 3.71e-01 | 76.7% | 72.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3495156 | 109.58.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA repair protein Rev1 C-terminal domain › DNA repair protein Rev1 C-terminal domain › REV1_C | 0.55 | 31.0 | 3.78e-01 | 78.8% | 90.6% |
| 3709292 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 35.0 | 3.69e-01 | 70.5% | 70.0% |
| 3624654 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.52 | 44.0 | 3.73e-01 | 95.2% | 86.2% |
| 2966706 | 3921.1.1.1 ↗ | alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Rnf-Nqr | 0.50 | 37.0 | 3.39e-01 | 75.3% | 89.0% |