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P47

Euk-Vir

Epinotia_aporema_granulovirus

P47__YP_006908571__Epinotia_aporema_granulovirus__166056

Identity

Accession:
YP_006908571 ↗
Protein ID:
P47
Kingdom:
euk

Quality

70.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Epinotia_aporema_granulovirus

TaxID: 166056

Cluster

View cluster (44 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-75
PDB
Domain cluster: rep: transcription_regulator__YP_009316134__Anticarsia_gemmatalis_multiple_nucleopolyhedrovirus__268591__D3-67
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05112.18 best Baculo_p47 47.4 3.20e-12 93.3% 19.3%
D2 high residues 82-148
PDB
Domain cluster: rep: p47__YP_009505996__Clostera_anastomosis_granulovirus_B__1986290__D104-164
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05112.18 best Baculo_p47 85.3 9.10e-24 100.0% 22.2%
D3 high residues 182-282
PDB
Domain cluster: rep: p47__YP_010086296__Hyposidra_talaca_nucleopolyhedrovirus__1070315__D179-256
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05112.18 best Baculo_p47 112.7 4.20e-32 100.0% 33.7%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.79 48.0 5.52e-01 87.1% 83.8%
4zosB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 52.0 5.29e-01 70.3% 95.9%
3m6uA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.73 49.0 5.24e-01 78.2% 80.2%
1lfpA03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.68 45.0 5.12e-01 88.1% 93.2%
1kwmA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.67 46.0 4.88e-01 70.3% 92.0%
6fh1B01 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.66 50.0 3.82e-01 80.2% 92.3%
2jx2A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 46.0 4.87e-01 73.3% 100.0%
2hiyA02 3.30.70.1260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › bacterial protein sp0830 like 0.64 49.0 5.09e-01 90.1% 88.0%
3lduA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.64 45.0 3.71e-01 72.3% 90.6%
3m4xA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.63 43.0 4.55e-01 76.2% 79.5%
2mzjA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.62 43.0 4.63e-01 71.3% 100.0%
6c80A03 3.40.462.10 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain 0.60 50.0 3.83e-01 90.1% 86.1%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.60 47.0 4.90e-01 88.1% 91.4%
3tqeA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.59 41.0 4.60e-01 87.1% 100.0%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.58 43.0 4.64e-01 91.1% 93.0%
2h5eA03 3.30.70.3280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III 0.57 47.0 4.31e-01 91.1% 81.0%
7wvzA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.57 48.0 3.38e-01 94.1% 58.3%
6fijA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.57 48.0 3.45e-01 95.0% 59.5%
2pd1A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 46.0 4.78e-01 87.1% 98.9%
2hg4D03 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.57 48.0 3.48e-01 95.0% 60.9%
7veeA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.57 48.0 3.42e-01 95.0% 59.6%
1wvqA00 3.40.1520.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like 0.56 52.0 4.37e-01 100.0% 92.0%
1hqiA00 3.90.56.10 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM 0.56 38.0 4.06e-01 71.3% 94.4%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 44.0 4.45e-01 90.1% 89.0%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.53 36.0 3.08e-01 70.3% 76.5%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 35.0 3.69e-01 90.1% 78.2%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.50 34.0 3.34e-01 70.3% 73.0%
3e54A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.50 38.0 3.37e-01 83.2% 67.3%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004165 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.72 48.0 5.64e-01 88.1% 98.6%
3408005 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.71 54.0 3.28e-01 80.2% 42.6%
4955127 304.163.1.0 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.69 47.0 5.44e-01 86.1% 100.0%
5071792 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.69 49.0 5.51e-01 74.3% 98.7%
5036777 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.68 47.0 5.30e-01 70.3% 98.7%
4940659 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.68 46.0 5.28e-01 86.1% 98.6%
4314745 304.117.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.68 45.0 5.34e-01 88.1% 98.6%
3386827 304.8.1.3 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NapD 0.68 47.0 4.90e-01 72.3% 87.4%
3291713 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.67 45.0 5.25e-01 85.1% 100.0%
5082594 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 44.0 5.16e-01 87.1% 98.6%
5078721 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.67 47.0 4.82e-01 72.3% 77.9%
4070496 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.66 44.0 4.89e-01 87.1% 92.0%
3959690 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.65 48.0 5.11e-01 93.1% 91.8%
4263279 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.65 44.0 4.76e-01 70.3% 85.9%
4379250 304.28.1.2 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.65 46.0 5.21e-01 87.1% 100.0%
4938146 2003.1.5.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.64 51.0 3.63e-01 84.2% 58.5%
4524601 304.117.1.6 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Sec_GG 0.64 45.0 5.11e-01 88.1% 100.0%
4658950 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.62 42.0 4.66e-01 87.1% 92.0%
3961146 304.11.1.1 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 0.61 45.0 4.20e-01 84.2% 62.0%
4979730 304.12.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.60 45.0 4.91e-01 88.1% 98.8%
2698983 304.11.1.1 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 0.60 44.0 4.82e-01 94.1% 97.5%
134075 304.9.1.15 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RNA_bind 0.57 45.0 4.53e-01 93.1% 85.3%
4217703 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.56 44.0 4.52e-01 87.1% 90.5%
3565650 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.56 44.0 4.58e-01 87.1% 95.6%