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P47

Euk-Vir

Buzura_suppressaria_nucleopolyhedrovirus

P47__YP_009001802__Buzura_suppressaria_nucleopolyhedrovirus__74320

Identity

Accession:
YP_009001802 ↗
Protein ID:
P47
Kingdom:
euk

Quality

71.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-66
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05112.18 best Baculo_p47 50.2 4.40e-13 93.7% 19.6%
D2 medium residues 72-160
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05112.18 best Baculo_p47 152.9 2.30e-44 100.0% 29.1%
D3 medium residues 209-280
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05112.18 best Baculo_p47 69.2 7.30e-19 100.0% 23.2%
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yxlA03 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.80 58.0 6.38e-01 83.3% 94.8%
1sqgA03 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.80 58.0 6.35e-01 83.3% 94.8%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 54.0 5.58e-01 84.7% 90.9%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.70 52.0 5.17e-01 88.9% 77.0%
1jqgA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.70 55.0 5.10e-01 91.7% 68.1%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.69 58.0 5.51e-01 93.1% 89.4%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.69 54.0 5.51e-01 84.7% 94.2%
2gj2A00 3.30.70.2070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › VP9 protein domain 0.67 56.0 5.47e-01 93.1% 88.6%
1kn6A00 3.30.70.850 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain 0.67 54.0 5.40e-01 88.9% 91.8%
2fgcA03 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.67 51.0 5.04e-01 94.4% 80.3%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 51.0 4.90e-01 87.5% 72.9%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.63 46.0 4.72e-01 79.2% 81.7%
2kt2A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 49.0 5.04e-01 87.5% 95.7%
3ihjA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.63 45.0 3.52e-01 79.2% 43.5%
1iugA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 51.0 4.51e-01 91.7% 69.4%
2lepA00 3.30.70.2350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 44.0 4.67e-01 79.2% 87.3%
4u9rA02 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 47.0 4.87e-01 83.3% 92.3%
2kx2A00 3.30.780.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.61 43.0 3.95e-01 75.0% 71.9%
2mkyA00 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.61 43.0 4.63e-01 76.4% 93.1%
7npaA02 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 47.0 4.50e-01 87.5% 75.3%
2dgrA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.58 43.0 4.47e-01 80.6% 92.5%
2dulA02 3.30.56.70 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › N2,N2-dimethylguanosine tRNA methyltransferase, C-terminal domain 0.58 42.0 4.59e-01 79.2% 94.9%
2if1A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.57 45.0 3.84e-01 88.9% 53.2%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 41.0 3.73e-01 80.6% 63.0%
2dawA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.57 48.0 3.98e-01 95.8% 95.5%
2ctfA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.56 40.0 3.72e-01 79.2% 62.7%
2fd6A01 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.56 30.0 3.68e-01 77.8% 92.3%
2cteA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.56 41.0 4.02e-01 80.6% 79.7%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 40.0 4.08e-01 79.2% 97.2%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 3.10e-01 70.8% 49.3%
8fkmA01 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 46.0 3.57e-01 94.4% 60.4%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.05e-01 75.0% 67.3%
2bw2A01 3.10.20.420 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain 0.54 32.0 3.50e-01 88.9% 74.5%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.12e-01 75.0% 53.0%
2i44B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.53 38.0 2.58e-01 77.8% 29.4%
4wxjB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 36.0 3.00e-01 72.2% 84.2%
6xzqA01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.53 38.0 3.02e-01 87.5% 34.6%
2e9hA01 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.52 38.0 3.36e-01 79.2% 52.2%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.09e-01 77.8% 64.1%
2ei0A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 43.0 3.40e-01 97.2% 44.1%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 2.93e-01 75.0% 44.5%
1zswA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 43.0 3.27e-01 95.8% 62.4%
3nqoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.26e-01 95.8% 81.4%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 35.0 2.97e-01 75.0% 53.8%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 37.0 3.11e-01 80.6% 90.3%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4936127 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.73 60.0 5.92e-01 87.5% 97.3%
5023882 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.73 59.0 6.01e-01 88.9% 94.3%
3593012 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.72 59.0 5.88e-01 91.7% 89.3%
3710757 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.71 58.0 5.88e-01 90.3% 94.3%
3715563 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.71 58.0 5.89e-01 90.3% 94.3%
1481304 304.5.1.4 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CdAMP_rec 0.71 50.0 5.42e-01 79.2% 91.4%
3390426 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.70 57.0 5.18e-01 91.7% 72.0%
3598887 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 56.0 5.60e-01 90.3% 93.3%
5072608 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 58.0 5.81e-01 93.1% 90.7%
4527859 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.69 56.0 5.50e-01 90.3% 87.5%
3277566 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 56.0 5.58e-01 90.3% 89.3%
5022251 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.69 58.0 3.76e-01 93.1% 51.7%
4943384 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.69 61.0 4.02e-01 98.6% 54.9%
4590927 304.28.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.67 54.0 5.08e-01 90.3% 87.8%
3403404 304.7.1.1 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 0.66 52.0 5.06e-01 91.7% 78.8%
3972855 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.65 52.0 5.19e-01 90.3% 89.3%
4968322 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.65 46.0 5.00e-01 75.0% 100.0%
3737610 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.64 47.0 4.41e-01 79.2% 80.0%
4217761 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.63 51.0 5.03e-01 91.7% 87.3%
4567824 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.63 50.0 3.66e-01 86.1% 35.4%
3426926 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.63 47.0 4.55e-01 83.3% 89.4%
3624999 304.7.1.1 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 0.63 52.0 4.88e-01 94.4% 75.6%
3889527 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.62 45.0 4.54e-01 80.6% 92.0%
4995074 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.61 48.0 3.40e-01 86.1% 27.6%
4535808 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.61 43.0 4.12e-01 75.0% 65.9%
4633568 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.60 43.0 3.80e-01 77.8% 95.5%
4499356 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.59 39.0 4.44e-01 72.2% 98.0%
3915214 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.59 43.0 4.35e-01 79.2% 95.7%
2594989 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.59 42.0 4.10e-01 79.2% 72.6%
3468979 312.1.1.18 a+b three layers › HIT-like › HIT-related › HIT-related › PF26217 0.59 45.0 3.57e-01 87.5% 90.0%
3611729 101.1.9.83 alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM 0.59 42.0 3.59e-01 76.4% 72.5%
4157844 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 47.0 4.65e-01 93.1% 88.7%
4956703 101.1.9.83 alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM 0.58 43.0 4.60e-01 79.2% 95.0%
4341664 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.58 42.0 4.10e-01 79.2% 78.8%
4201017 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.54 39.0 3.04e-01 75.0% 62.5%
4927177 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.54 37.0 3.05e-01 75.0% 45.3%
3957538 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.53 37.0 3.03e-01 75.0% 40.7%
4031251 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.53 38.0 3.06e-01 76.4% 68.3%
4032753 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.53 37.0 3.02e-01 75.0% 71.5%
4424168 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.52 36.0 3.03e-01 73.6% 75.6%
4928059 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.52 35.0 2.97e-01 70.8% 51.5%
3174787 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.52 35.0 3.26e-01 70.8% 53.7%
5050075 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.52 37.0 3.05e-01 77.8% 84.0%
3283183 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.52 37.0 2.95e-01 76.4% 56.8%
2549573 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.51 36.0 2.97e-01 75.0% 50.0%
3493123 101.1.1.321 alpha arrays › HTH › HTH › Three-helical HTH › PheRS_DBD3 0.51 37.0 3.34e-01 95.8% 55.2%