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P48
Euk-VirAdoxophyes_orana_nucleopolyhedrovirus
P48__YP_002300594__Adoxophyes_orana_nucleopolyhedrovirus__542343
Identity
- Accession:
- YP_002300594 ↗
- Protein ID:
- P48
- Kingdom:
- euk
Quality
81.4
mean pLDDT
Taxonomy
TaxID: 542343
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-204
Domain cluster:
rep: hypothetical_protein__YP_667882__Neodiprion_abietis_NPV__204507__D58-231
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04878.20 best | Baculo_p48 | 278.8 | 1.00e-82 | 98.5% | 54.4% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ckoA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.55 | 46.0 | 4.21e-01 | 89.0% | 98.9% |
| 1st6A03 | 1.20.120.810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle | 0.55 | 34.0 | 3.29e-01 | 82.0% | 53.3% |
| 7craA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 24.0 | 3.49e-01 | 99.0% | 92.4% |
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.53 | 27.0 | 3.20e-01 | 83.5% | 69.2% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.52 | 32.0 | 3.59e-01 | 79.5% | 80.1% |
| 3o7qA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 30.0 | 3.12e-01 | 82.5% | 57.3% |
| 7smgD00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 32.0 | 3.67e-01 | 100.0% | 85.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3469354 | 6004.1.1.2 ↗ | extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 | 0.58 | 29.0 | 3.72e-01 | 75.0% | 80.0% |
| 3577038 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.54 | 28.0 | 2.70e-01 | 77.0% | 42.2% |
| 4029045 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.52 | 31.0 | 2.79e-01 | 73.5% | 40.7% |
| 3290926 | 613.1.1.1 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c | 0.50 | 28.0 | 3.19e-01 | 99.5% | 71.3% |
D2
high
residues 208-351
Domain cluster:
rep: P45__YP_003517840__Lymantria_xylina_nucleopolyhedrovirus__166921__D212-357
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04878.20 best | Baculo_p48 | 160.2 | 1.10e-46 | 100.0% | 34.4% |