←Back to structures
P4a_precursor
Euk-VirAdoxophyes_honmai_entomopoxvirus_L
P4a_precursor__YP_008004010__Adoxophyes_honmai_entomopoxvirus_L__1293540
Identity
- Accession:
- YP_008004010 ↗
- Protein ID:
- P4a_precursor
- Kingdom:
- euk
Quality
42.3
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Betaentomopoxvirus›
Adoxophyes_honmai_entomopoxvirus_'L'
TaxID: 1293540
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1034-1140
D2
medium
residues 1-53
D3
medium
residues 636-700
D4
medium
residues 701-861
Domain cluster:
rep: p4a_precursor__YP_009268819__Pteropox_virus__1873698__D448-606_642-653
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1neiA00 | 3.30.160.220 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG | 0.54 | 21.0 | 3.24e-01 | 93.2% | 91.7% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.54 | 19.0 | 2.45e-01 | 87.0% | 47.8% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.54 | 27.0 | 3.48e-01 | 70.8% | 84.3% |
| 1txuA02 | 1.20.1050.80 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › VPS9 domain | 0.51 | 38.0 | 3.90e-01 | 82.6% | 78.8% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 30.0 | 3.09e-01 | 70.8% | 59.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3544887 | 627.1.1.1 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 | 0.58 | 40.0 | 4.09e-01 | 81.4% | 72.9% |
| 3675831 | 601.7.1.35 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › UFL1_C | 0.52 | 30.0 | 3.22e-01 | 72.7% | 63.7% |
| 3231718 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.51 | 39.0 | 2.58e-01 | 78.9% | 61.7% |
| 5000798 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.51 | 29.0 | 2.79e-01 | 82.6% | 47.0% |
| 3408734 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 38.0 | 3.06e-01 | 77.6% | 88.5% |