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P4a_precursor
Euk-VirEastern_grey_kangaroopox_virus
P4a_precursor__YP_010085400__Eastern_grey_kangaroopox_virus__2042482
Identity
- Accession:
- YP_010085400 ↗
- Protein ID:
- P4a_precursor
- Kingdom:
- euk
Quality
76.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Macropopoxvirus›
Eastern_grey_kangaroopox_virus
TaxID: 2042482
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 244-363
Domain cluster:
rep: P4a_precursor__YP_010085236__Western_grey_kangaroopox_virus__1566307__D246-346
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03395.20 best | Pox_P4A | 103.7 | 8.40e-30 | 100.0% | 13.7% |
D2
medium
residues 364-446
Domain cluster:
rep: putative_virion_core_protein_P4a_precursor__YP_009112825__Parapoxvirus_red_deer_HL953__1579460__D14-39_372-451
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03395.20 best | Pox_P4A | 146.7 | 8.70e-43 | 100.0% | 9.2% |
D3
medium
residues 462-532_561-583
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03395.20 best | Pox_P4A | 120.4 | 7.60e-35 | 76.6% | 8.0% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cjdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 49.0 | 3.94e-01 | 86.2% | 67.6% |
| 3ni7A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 46.0 | 3.80e-01 | 88.3% | 66.1% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.55 | 38.0 | 3.33e-01 | 70.2% | 70.7% |
| 8einA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 38.0 | 2.77e-01 | 75.5% | 68.0% |
| 4e40A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.53 | 38.0 | 2.81e-01 | 75.5% | 80.0% |
| 3ea0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.08e-01 | 87.2% | 92.5% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 35.0 | 3.64e-01 | 71.3% | 91.9% |
| 1vu2201 | 1.20.58.1070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 41.0 | 3.49e-01 | 93.6% | 80.0% |
| 3p4tA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 38.0 | 3.27e-01 | 80.9% | 81.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3511170 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.60 | 39.0 | 4.25e-01 | 70.2% | 81.3% |
| 3876261 | 627.1.1.1 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 | 0.57 | 49.0 | 4.11e-01 | 100.0% | 68.0% |
| 3390400 | 627.1.1.1 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 | 0.57 | 49.0 | 4.31e-01 | 100.0% | 80.7% |
| 3475297 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.57 | 36.0 | 3.49e-01 | 98.9% | 57.1% |
| 3799795 | 627.1.1.1 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 | 0.54 | 46.0 | 4.05e-01 | 100.0% | 78.7% |
| 2725659 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 37.0 | 3.42e-01 | 74.5% | 80.2% |
| 3407723 | 109.4.1.513 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CCDC142 | 0.52 | 42.0 | 2.83e-01 | 91.5% | 34.2% |
| 5030200 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.52 | 35.0 | 2.66e-01 | 90.4% | 27.4% |
| 3741529 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 42.0 | 3.44e-01 | 92.6% | 47.8% |
| 3188959 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 33.0 | 3.28e-01 | 89.4% | 62.2% |
D4
medium
residues 533-560_584-630
D5
medium
residues 631-698
D6
medium
residues 711-775
D7
medium
residues 776-893