P4b_precursor

Euk-Vir

Adoxophyes_honmai_entomopoxvirus_L

P4b_precursor__YP_008004005__Adoxophyes_honmai_entomopoxvirus_L__1293540

Identity

65.6 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Betaentomopoxvirus› Adoxophyes_honmai_entomopoxvirus_'L'

TaxID: 1293540

View cluster (5 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 110-173

PDB

Domain cluster: rep: P4b_precursor__YP_008004566__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D108-179

D2 medium residues 274-369

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5l92A00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.59	53.0	3.53e-01	100.0%	30.8%
1gs0A01	1.20.142.10	Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain	0.57	44.0	3.98e-01	81.2%	69.8%
1wtyA00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.56	37.0	3.48e-01	76.0%	54.3%
2jbrA01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.52	40.0	3.79e-01	88.5%	67.2%
1wkbA03	1.10.730.10	Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1	0.52	37.0	3.52e-01	76.0%	96.7%
1q90B00	1.20.810.10	Mainly Alpha › Up-down Bundle › Cytochrome Bc1 Complex; Chain C › Cytochrome Bc1 Complex; Chain C	0.51	40.0	3.16e-01	86.5%	89.6%
2vqgA00	1.10.10.1280	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Alpha-helical porin B/porin C	0.50	32.0	3.53e-01	91.7%	81.6%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3400498	105.1.1.1 ↗	alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › HLH	0.72	40.0	3.68e-01	70.8%	43.3%
3749490	109.24.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9	0.66	40.0	3.53e-01	93.8%	42.2%
3732748	149.1.1.1 ↗	alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450	0.57	51.0	3.22e-01	100.0%	27.9%
3234731	101.1.1.21 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5	0.57	36.0	4.26e-01	79.2%	95.4%
3309133	2484.1.1.67 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3	0.56	34.0	3.66e-01	92.7%	69.4%
None	—		0.53	47.0	3.69e-01	99.0%	82.9%
4278665	140.1.1.11 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1	0.53	47.0	3.71e-01	100.0%	84.3%
3782027	524.1.1.1 ↗	alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC	0.51	36.0	3.08e-01	74.0%	66.3%

D3 medium residues 370-438_457-513

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3wxeA00	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.63	48.0	3.59e-01	100.0%	32.9%
8bs9A01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.56	51.0	3.84e-01	100.0%	49.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3600084	219.1.1.0 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases	0.58	54.0	4.08e-01	100.0%	64.9%
3580013	219.1.1.143 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, OTU	0.57	51.0	3.39e-01	96.8%	31.4%

D4 medium residues 514-657

PDB

Domain cluster: rep: Virion_core_protein_P4b__YP_010377111__Monkeypox_virus__10244__D515-644

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03292.20 best	Pox_P4B	40.2	2.10e-10	98.6%	19.8%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1kaxA02	3.30.30.30	Alpha Beta › 2-Layer Sandwich › Defensin A-like ›	0.54	16.0	2.45e-01	70.1%	58.2%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3404595	219.1.1.14 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin	0.55	31.0	2.93e-01	91.7%	43.9%
3786534	219.1.1.0 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases	0.52	30.0	2.79e-01	84.7%	44.4%
3741085	219.1.1.13 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core	0.51	29.0	2.74e-01	88.2%	43.9%