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P4c_precursor
Euk-VirEptesipox_virus
P4c_precursor__YP_009408074__Eptesipox_virus__1329402
Identity
- Accession:
- YP_009408074 ↗
- Protein ID:
- P4c_precursor
- Kingdom:
- euk
Quality
60.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Vespertilionpoxvirus›
Eptesipox_virus
TaxID: 1329402
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-121_161-203
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.64 | 29.0 | 3.12e-01 | 75.5% | 46.3% |
| 1xmkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 32.0 | 3.65e-01 | 91.5% | 74.7% |
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 30.0 | 3.53e-01 | 85.8% | 81.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3192081 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.58 | 38.0 | 3.63e-01 | 91.5% | 55.2% |
| 3342534 | 604.5.1.31 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TRAM_LAG1_CLN8 | 0.58 | 48.0 | 3.72e-01 | 90.6% | 79.0% |
| 4067342 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.57 | 50.0 | 3.49e-01 | 98.1% | 92.6% |
| 56812 | 620.1.1.0 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases | 0.53 | 37.0 | 3.20e-01 | 83.0% | 43.9% |
| 3601268 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.52 | 37.0 | 3.11e-01 | 74.5% | 53.7% |
| 3478961 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 45.0 | 3.14e-01 | 96.2% | 63.2% |
| 4032 | 620.1.1.4 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DUF1993 | 0.50 | 35.0 | 3.02e-01 | 84.0% | 44.4% |
D2
medium
residues 204-333
Domain cluster:
rep: hypothetical_protein_KM543_gp145__YP_010085813__Orthopoxvirus_Abatino__2478919__D5-114
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06086.19 best | Pox_A30L_A26L | 72.5 | 5.30e-20 | 86.9% | 48.2% |
D3
medium
residues 334-417_442-489
D4
medium
residues 545-611