←Back to structures
P4c_precursor
Euk-VirSea_otter_poxvirus
P4c_precursor__YP_009480654__Sea_otter_poxvirus__1416741
Identity
- Accession:
- YP_009480654 ↗
- Protein ID:
- P4c_precursor
- Kingdom:
- euk
Quality
78.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Mustelpoxvirus›
Sea_otter_poxvirus
TaxID: 1416741
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-233
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06086.19 best | Pox_A30L_A26L | 198.4 | 1.30e-58 | 90.3% | 98.5% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kgqA01 | 1.10.166.10 | Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain | 0.58 | 21.0 | 3.57e-01 | 74.6% | 100.0% |
| 4h0eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 19.0 | 3.17e-01 | 80.3% | 95.7% |
| 4hzuS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.51 | 32.0 | 3.72e-01 | 100.0% | 86.6% |
| 5cqgA05 | 1.10.357.90 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Telomerase reverse transcriptase (TERT), thumb domain | 0.50 | 33.0 | 3.54e-01 | 81.1% | 76.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4889877 | 7082.1.1.1 ↗ | alpha arrays › N-terminal domain of viral protein A26 › N-terminal domain of viral protein A26 › N-terminal domain of viral protein A26 › Pox_A30L_A26L | 0.91 | 78.0 | 8.39e-01 | 93.4% | 100.0% |
| 4959083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 24.0 | 2.72e-01 | 73.2% | 49.4% |
| 3582684 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 40.0 | 4.11e-01 | 100.0% | 77.3% |
| 4659871 | 3001.1.1.1 ↗ | alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 | 0.53 | 24.0 | 3.53e-01 | 79.8% | 98.9% |
D2
medium
residues 279-380
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 42.0 | 3.87e-01 | 90.2% | 64.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2526309 | 7083.1.1.1 ↗ | beta sandwiches › C-terminal domain of viral protein A26 › C-terminal domain of viral protein A26 › C-terminal domain of viral protein A26 › PF31251 | 0.86 | 74.0 | 6.51e-01 | 94.1% | 65.7% |
| 3734418 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.54 | 40.0 | 2.91e-01 | 80.4% | 93.3% |
| 5034902 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.51 | 31.0 | 2.80e-01 | 82.4% | 42.8% |
| 4241460 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.50 | 30.0 | 2.80e-01 | 83.3% | 43.7% |
| 4994977 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.50 | 30.0 | 2.80e-01 | 83.3% | 44.0% |
D3
medium
residues 462-519