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P4c_precursor

Euk-Vir

Eastern_grey_kangaroopox_virus

P4c_precursor__YP_010085418__Eastern_grey_kangaroopox_virus__2042482

Identity

Accession:
YP_010085418 ↗
Protein ID:
P4c_precursor
Kingdom:
euk

Quality

69.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Macropopoxvirus› Eastern_grey_kangaroopox_virus

TaxID: 2042482

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 214-316
PDB
Domain cluster: rep: A-type_inclusion_protein__YP_009046421__Pigeonpox_virus__10264__D227-336
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kp5A00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.69 53.0 5.65e-01 87.4% 93.4%
1npsA00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.67 52.0 5.60e-01 87.4% 96.6%
3hzbC00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.67 53.0 5.64e-01 85.4% 97.7%
3snyA00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.67 52.0 5.61e-01 84.5% 97.7%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.63 56.0 5.19e-01 100.0% 98.5%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.61 47.0 4.53e-01 81.6% 98.3%
4amwA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 38.0 4.39e-01 97.1% 93.0%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 47.0 4.05e-01 85.4% 91.3%
2orzA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 47.0 4.11e-01 87.4% 83.6%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 46.0 4.18e-01 86.4% 91.8%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 46.0 4.19e-01 85.4% 90.8%
3bn6A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 47.0 4.16e-01 89.3% 91.1%
6b9tF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 43.0 4.29e-01 82.5% 73.4%
1jhjA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 47.0 4.09e-01 88.3% 86.3%
2hevF00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 45.0 4.30e-01 86.4% 81.7%
4oy7E00 2.70.50.50 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 0.57 48.0 3.98e-01 94.2% 94.4%
5hbaA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 4.28e-01 89.3% 85.0%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 46.0 4.22e-01 90.3% 91.7%
2qqkA02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.57 43.0 4.23e-01 81.6% 74.8%
3besR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 38.0 4.12e-01 95.1% 84.3%
4nreA01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.56 40.0 3.83e-01 73.8% 95.0%
6a48A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 45.0 4.06e-01 87.4% 91.8%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 44.0 4.20e-01 90.3% 71.3%
2cdoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 45.0 4.11e-01 87.4% 89.9%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 4.32e-01 85.4% 87.3%
2wzpP03 2.60.120.880 Mainly Beta › Sandwich › Jelly Rolls › 0.55 41.0 3.92e-01 80.6% 91.3%
3fmgA02 2.60.120.800 Mainly Beta › Sandwich › Jelly Rolls › Rotavirus outer-layer protein VP7, domain 2 0.55 40.0 4.28e-01 78.6% 92.0%
2irmA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.55 47.0 3.33e-01 95.1% 87.6%
4a4aA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 45.0 4.12e-01 89.3% 88.1%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 44.0 3.87e-01 88.3% 89.5%
2qqkA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.55 43.0 4.13e-01 83.5% 81.2%
2bgoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 42.0 4.05e-01 81.6% 87.1%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 47.0 3.94e-01 95.1% 87.6%
4ohvA01 2.60.120.1030 Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain 0.54 40.0 4.45e-01 91.3% 100.0%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 44.0 4.04e-01 89.3% 75.2%
3j4uH00 2.60.120.1110 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 4.01e-01 89.3% 84.3%
7wdtA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 43.0 3.92e-01 89.3% 76.0%
4nn5C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 4.28e-01 87.4% 87.9%
1loxA02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.54 38.0 3.74e-01 73.8% 94.6%
4zxeC00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 43.0 3.95e-01 89.3% 72.8%
1sfpA00 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.53 43.0 4.24e-01 88.3% 86.5%
2j1aA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 43.0 3.96e-01 91.3% 78.0%
2yfuA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 43.0 3.95e-01 91.3% 73.6%
2crmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 4.17e-01 95.1% 100.0%
1x5xA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 4.07e-01 88.3% 79.8%
2jllA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 4.21e-01 88.3% 88.8%
1x5aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 4.03e-01 89.3% 90.1%
6rpxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 4.08e-01 100.0% 95.3%
2bv4A00 2.60.120.400 Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin 0.52 37.0 3.67e-01 76.7% 87.6%
3mpcA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 4.03e-01 88.3% 86.5%
7zxkB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.78e-01 94.2% 88.6%
4p25D01 2.40.510.10 Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses 0.52 36.0 3.00e-01 72.8% 90.7%
2vm9A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 41.0 3.65e-01 88.3% 92.9%
1ah1A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.87e-01 88.3% 83.7%
8bvoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.90e-01 94.2% 91.9%
1zvfB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 45.0 3.85e-01 99.0% 89.0%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2526309 7083.1.1.1 ↗ beta sandwiches › C-terminal domain of viral protein A26 › C-terminal domain of viral protein A26 › C-terminal domain of viral protein A26 › PF31251 0.87 80.0 7.05e-01 100.0% 70.7%
2049 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.67 52.0 5.60e-01 87.4% 96.6%
378279 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.67 53.0 5.64e-01 85.4% 97.7%
433150 72.1.1.2 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Inhibitor_I36 0.67 52.0 5.56e-01 84.5% 95.5%
223801 10.2.1.67 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Spike_JR1 0.65 43.0 4.70e-01 80.6% 81.4%
3727692 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 51.0 4.24e-01 88.3% 91.9%
3612035 10.2.1.55 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.61 49.0 4.88e-01 87.4% 83.6%
3830260 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 47.0 3.00e-01 85.4% 20.0%
5078522 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.60 43.0 4.30e-01 75.7% 95.2%
3243572 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 48.0 4.30e-01 87.4% 80.7%
3231214 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 49.0 4.64e-01 88.3% 77.5%
3883934 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.59 44.0 3.80e-01 80.6% 63.5%
3854455 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.58 47.0 3.83e-01 86.4% 73.7%
None — 0.58 43.0 3.82e-01 86.4% 54.0%
None — 0.58 43.0 3.81e-01 86.4% 54.0%
4295323 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 45.0 4.56e-01 86.4% 89.5%
4950754 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 44.0 4.43e-01 81.6% 86.5%
3275307 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.57 44.0 4.34e-01 83.5% 88.7%
3796900 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 45.0 4.39e-01 87.4% 84.9%
4136414 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.57 44.0 3.82e-01 82.5% 86.9%
5039565 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 45.0 4.24e-01 86.4% 74.6%
3594262 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 47.0 4.20e-01 89.3% 80.7%
3217018 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 45.0 4.32e-01 87.4% 90.8%
5025697 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 45.0 4.34e-01 85.4% 78.3%
5007276 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 44.0 4.06e-01 86.4% 91.4%
3700818 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 45.0 3.84e-01 89.3% 89.4%
3186200 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 39.0 4.23e-01 100.0% 90.6%
1298682 10.32.1.168 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › HA70_C 0.56 44.0 4.05e-01 85.4% 71.6%
3833339 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.56 49.0 4.11e-01 97.1% 86.3%
5033327 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 4.34e-01 94.2% 92.9%
3928855 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.55 44.0 4.24e-01 84.5% 80.9%
5021913 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.55 39.0 4.13e-01 73.8% 84.4%
5068910 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 44.0 4.06e-01 88.3% 68.9%
3214080 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 44.0 4.49e-01 88.3% 91.0%
146648 10.23.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in outer capsid glycoprotein VP7 › Jelly-roll domain in outer capsid glycoprotein VP7 › VP7 0.54 40.0 4.21e-01 82.5% 87.2%
1569630 12.1.1.50 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd 0.54 42.0 4.35e-01 82.5% 94.7%
1069108 10.2.1.58 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gp10-like 0.54 43.0 4.25e-01 87.4% 86.5%
4029608 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 42.0 4.18e-01 88.3% 80.0%
5020888 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 40.0 3.82e-01 78.6% 78.3%
5041322 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 42.0 4.26e-01 86.4% 88.6%
4969296 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 40.0 4.19e-01 100.0% 91.1%
3392132 10.32.1.86 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C_2 0.53 43.0 3.73e-01 89.3% 66.7%
3421268 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.53 39.0 4.02e-01 78.6% 83.2%
4014712 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 37.0 3.60e-01 73.8% 90.8%
5025287 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 4.09e-01 87.4% 98.7%
4498731 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 41.0 3.79e-01 87.4% 91.4%
3399280 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.52 42.0 3.93e-01 88.3% 81.5%
5038947 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 36.0 3.87e-01 72.8% 100.0%
3594928 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 41.0 3.94e-01 88.3% 84.2%
3964292 1.1.13.38 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 0.51 38.0 3.73e-01 78.6% 80.9%
4010630 2004.1.1.10 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.51 36.0 2.43e-01 75.7% 17.9%
5060454 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.93e-01 89.3% 80.0%
3922519 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 40.0 3.78e-01 88.3% 68.5%
4961062 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.91e-01 86.4% 90.4%
3885160 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.50 39.0 3.95e-01 85.4% 95.2%
D2 high residues 393-464
PDB
D3 medium residues 1-143
PDB
Domain cluster: rep: MC130L__NP_044081__Molluscum_contagiosum_virus_subtype_1__10280__D3-150
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06086.19 best Pox_A30L_A26L 127.8 5.90e-37 95.8% 71.5%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8a0rA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 39.0 4.08e-01 85.3% 76.9%
3lszA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.56 36.0 3.82e-01 84.6% 72.0%
4i1eA03 1.25.10.30 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain 0.55 42.0 4.34e-01 80.4% 84.2%
3bxjB03 1.10.506.10 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 0.51 46.0 3.98e-01 98.6% 81.1%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 33.0 3.74e-01 72.7% 90.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4889877 7082.1.1.1 ↗ alpha arrays › N-terminal domain of viral protein A26 › N-terminal domain of viral protein A26 › N-terminal domain of viral protein A26 › Pox_A30L_A26L 0.86 83.0 7.21e-01 100.0% 74.0%
3619494 4193.1.1.1 ↗ alpha arrays › RUN domain › RUN domain › RUN domain › RUN 0.59 43.0 3.89e-01 75.5% 92.8%
3659624 1016.1.1.0 ↗ alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 0.57 29.0 2.98e-01 100.0% 49.3%
3371348 101.1.10.13 ↗ alpha arrays › HTH › HTH › Cyclin-like › DUF3452 0.52 40.0 3.49e-01 79.7% 83.3%
3412004 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 31.0 3.66e-01 70.6% 88.0%
D4 medium residues 144-208
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06086.19 best Pox_A30L_A26L 37.8 2.20e-09 81.5% 26.4%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.61 41.0 4.21e-01 70.8% 100.0%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 46.0 3.95e-01 87.7% 93.5%
2hydA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.54 37.0 2.42e-01 72.3% 41.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3802945 109.4.1.1155 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_At3g06530 0.60 48.0 3.44e-01 100.0% 44.4%
3172733 630.1.1.4 ↗ a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › PF28952 0.57 50.0 3.95e-01 100.0% 97.1%
3704165 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.56 40.0 2.83e-01 80.0% 66.3%
4970403 4163.1.1.0 ↗ alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like 0.55 42.0 3.43e-01 93.8% 42.2%
3219117 604.39.1.12 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › VTT_dom 0.54 45.0 3.36e-01 100.0% 67.2%
3600098 7524.1.1.1 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh 0.51 43.0 2.76e-01 98.5% 81.1%
3934960 190.1.1.2 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › CHDNT 0.51 36.0 3.60e-01 78.5% 85.7%
3644674 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.51 42.0 3.30e-01 100.0% 81.8%