P74

Euk-Vir

Lymantria_xylina_nucleopolyhedrovirus

P74__YP_003517764__Lymantria_xylina_nucleopolyhedrovirus__166921

Identity

75.7 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Lymantria_xylina_nucleopolyhedrovirus

TaxID: 166921

View cluster (47 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 573-658

PDB

D2 medium residues 31-73_261-314

PDB

Domain cluster: rep: P74__YP_009666801__Mythimna_unipuncta_nucleopolyhedrovirus__447897__D80-131_331-372

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08404.16 best	Baculo_p74_N	54.6	1.30e-14	46.4%	14.3%

D3 medium residues 74-179_245-260

PDB

Domain cluster: rep: P74__YP_008378373__Choristoneura_rosaceana_nucleopolyhedrovirus__58094__D69-138

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08404.16 best	Baculo_p74_N	161.4	4.00e-47	97.5%	34.3%

D4 medium residues 180-244

PDB

Domain cluster: rep: p74__YP_009552156__Malacosoma_neustria_nucleopolyhedrovirus__38012__D161-252

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08404.16 best	Baculo_p74_N	105.0	5.90e-30	100.0%	21.7%

D5 medium residues 357-477_503-537

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04583.18 best	Baculo_p74	165.9	1.40e-48	79.5%	56.7%
PF04583.18	Baculo_p74	29.3	8.60e-07	23.1%	14.9%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2i0mA01	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.55	25.0	3.10e-01	78.2%	65.1%
4oydB00	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.51	29.0	3.25e-01	77.6%	71.8%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3788953	142.1.1.0 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors	0.61	35.0	4.57e-01	85.3%	98.9%
1206502	604.5.1.2 ↗	alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU	0.55	25.0	3.10e-01	78.2%	65.1%
3678111	3711.1.1.4 ↗	alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DOG1	0.55	39.0	3.39e-01	71.8%	69.0%
3260599	4177.1.1.2 ↗	alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR	0.55	42.0	3.57e-01	80.8%	72.1%
3891868	5086.1.1.21 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › CARMIL_C	0.53	41.0	3.75e-01	79.5%	82.0%
3586922	1075.1.2.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX	0.52	39.0	3.71e-01	98.7%	65.3%