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P74

Euk-Vir

Mythimna_unipuncta_nucleopolyhedrovirus

P74__YP_009666801__Mythimna_unipuncta_nucleopolyhedrovirus__447897

Identity

Accession:: YP_009666801 ↗
Protein ID:: P74
Kingdom:: euk

Quality

70.9 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Mythimna_unipuncta_nucleopolyhedrovirus

TaxID: 447897

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 80-131_331-372

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08404.16 best	Baculo_p74_N	48.7	8.60e-13	57.5%	16.7%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4tz7A02	3.30.810.10	Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase Iibeta; Chain: A, domain 2 › 2-Layer Sandwich	0.51	36.0	3.30e-01	76.6%	59.7%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4980941	304.6.1.1 ↗	a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C	0.54	48.0	3.57e-01	100.0%	64.0%
5003164	304.6.1.1 ↗	a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C	0.53	46.0	3.53e-01	98.9%	66.4%
3735269	304.6.1.0 ↗	a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain	0.53	46.0	3.42e-01	100.0%	64.6%
5057084	312.1.1.1 ↗	a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_transf	0.52	45.0	3.22e-01	100.0%	68.0%
4945560	304.6.1.0 ↗	a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain	0.52	46.0	3.50e-01	98.9%	65.2%
4995855	304.6.1.1 ↗	a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C	0.52	47.0	3.45e-01	100.0%	65.9%

D2 high residues 643-713

PDB

D3 medium residues 132-251_313-330

PDB

Domain cluster: rep: p74_protein__YP_002321437__Oryctes_rhinoceros_nudivirus__92521__D70-201_245-270_548-566

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08404.16 best	Baculo_p74_N	191.4	3.00e-56	88.4%	40.0%

D4 medium residues 252-312

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08404.16 best	Baculo_p74_N	82.8	3.50e-23	100.0%	20.0%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3jc6201	3.30.1640.10	Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1	0.51	39.0	3.43e-01	86.9%	60.8%
3k4oA00	3.40.1160.10	Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like	0.51	40.0	2.80e-01	98.4%	85.0%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3895419	221.4.1.24 ↗	a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743	0.55	44.0	2.91e-01	93.4%	64.1%

D5 medium residues 401-458_608-642

PDB

D6 medium residues 459-492_560-607

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04583.18 best	Baculo_p74	26.2	8.00e-06	59.8%	22.8%
PF04583.18	Baculo_p74	23.3	5.90e-05	46.3%	15.8%

CATH (25)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3tl4X02	1.10.10.2420	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.63	35.0	3.68e-01	84.1%	59.7%
1wp7A00	1.10.287.770	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like	0.62	45.0	5.01e-01	96.3%	96.9%
3fblA00	1.20.58.800	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.60	37.0	3.71e-01	91.5%	62.2%
2ieqA00	1.20.5.300	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.59	44.0	4.29e-01	98.8%	72.7%
3ehfD01	1.20.5.1930	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.59	42.0	4.71e-01	96.3%	98.4%
4abmD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.58	45.0	4.70e-01	97.6%	87.0%
3rq9A00	1.10.287.2500	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.58	41.0	4.23e-01	98.8%	76.9%
1ku9A02	1.10.287.450	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.58	42.0	4.77e-01	97.6%	98.4%
6tkvA01	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.57	43.0	4.66e-01	97.6%	95.6%
1nt2B02	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.56	42.0	4.56e-01	98.8%	97.0%
4modA00	1.20.5.300	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.56	43.0	4.46e-01	98.8%	88.2%
2fb5A01	1.10.287.770	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like	0.56	46.0	4.87e-01	97.6%	100.0%
3r0qA02	2.70.160.11	Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1	0.54	47.0	3.58e-01	100.0%	77.4%
2y39A00	1.20.120.1490	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.54	46.0	4.12e-01	98.8%	67.3%
5dn6J00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.54	40.0	4.26e-01	96.3%	87.8%
3x3bA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.54	42.0	2.96e-01	84.1%	84.9%
2qe7G01	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.54	42.0	3.98e-01	98.8%	70.1%
4i0xG00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.54	41.0	4.39e-01	97.6%	97.1%
2oduA02	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.52	43.0	3.98e-01	100.0%	69.5%
2q5zB00	1.10.287.1080	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like	0.52	37.0	3.54e-01	100.0%	63.8%
1x3kA01	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.51	38.0	3.25e-01	82.9%	76.2%
1qsdA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.51	44.0	4.06e-01	92.7%	82.4%
2yf4F00	1.10.3420.10	Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain	0.51	44.0	3.62e-01	100.0%	53.8%
1qu7A00	1.10.287.950	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein	0.51	46.0	3.30e-01	98.8%	53.7%
1j1jA02	1.20.58.200	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2	0.50	36.0	3.59e-01	98.8%	71.8%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3718443	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.64	46.0	4.35e-01	95.1%	64.2%
4220179	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.64	49.0	4.51e-01	95.1%	63.8%
4949254	4177.1.1.0 ↗	alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like	0.63	51.0	3.92e-01	86.6%	91.0%
3876274	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.61	46.0	3.48e-01	93.9%	32.7%
3683912	192.7.1.0 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm	0.59	43.0	3.79e-01	98.8%	52.5%
4439850	632.2.1.36 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › AATF-Che1	0.58	46.0	3.35e-01	84.1%	67.6%
4602458	4082.1.1.5 ↗	alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › PF27473	0.56	50.0	4.47e-01	97.6%	93.9%
3510680	192.15.1.0 ↗	alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains	0.56	37.0	4.01e-01	76.8%	81.4%
3742773	3748.1.1.4 ↗	extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › RPN11_C	0.54	45.0	4.43e-01	100.0%	83.0%
3799197	3748.1.1.0 ↗	extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	0.54	45.0	4.39e-01	100.0%	82.0%
4978829	150.5.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like	0.54	42.0	4.51e-01	97.6%	97.1%
3491748	603.2.1.0 ↗	alpha bundles › STAT-like › STAT › STAT	0.53	49.0	3.72e-01	100.0%	60.0%
4172479	633.6.1.0 ↗	alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like	0.53	46.0	3.87e-01	95.1%	100.0%
3638005	192.15.1.0 ↗	alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains	0.53	43.0	4.46e-01	96.3%	97.3%
5079633	7094.1.1.4 ↗	alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › PF27273	0.52	48.0	4.74e-01	97.6%	95.3%