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PAN_APPLE-like_domain_containing_protein
Euk-VirChrysochromulina_ericina_virus
PAN_APPLE-like_domain_containing_protein__YP_009173449__Chrysochromulina_ericina_virus__455364
Identity
- Accession:
- YP_009173449 ↗
- Protein ID:
- PAN_APPLE-like_domain_containing_protein
- Kingdom:
- euk
Quality
51.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Chrysochromulina_ericina_virus
TaxID: 455364
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 46-112
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00024.33 best | PAN_1 | 31.6 | 1.60e-07 | 80.6% | 63.2% |
| PF14295.13 | PAN_4 | 33.8 | 3.90e-08 | 65.7% | 100.0% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yilA02 | 3.30.30.180 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.82 | 58.0 | 6.58e-01 | 73.1% | 100.0% |
| 2ll3A00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.81 | 62.0 | 6.12e-01 | 80.6% | 78.6% |
| 5eokA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.77 | 62.0 | 5.63e-01 | 86.6% | 71.9% |
| 2m88A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 44.0 | 4.10e-01 | 76.1% | 60.5% |
| 1z7mC00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 40.0 | 2.69e-01 | 74.6% | 80.5% |
| 1nrwA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.52 | 35.0 | 2.86e-01 | 70.1% | 63.1% |
| 3rtxA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 35.0 | 2.73e-01 | 73.1% | 89.1% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3437400 | 390.1.1.8 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_4 | 0.89 | 71.0 | 6.81e-01 | 88.1% | 74.7% |
| 3458273 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.87 | 68.0 | 6.55e-01 | 83.6% | 73.3% |
| 3579295 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.86 | 73.0 | 6.49e-01 | 89.6% | 71.1% |
| 3936889 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.86 | 73.0 | 6.79e-01 | 89.6% | 76.2% |
| 3936712 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.86 | 70.0 | 6.76e-01 | 86.6% | 79.7% |
| 3211630 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.85 | 69.0 | 6.33e-01 | 86.6% | 68.2% |
| 3925874 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.85 | 70.0 | 6.43e-01 | 88.1% | 75.3% |
| 3440136 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.85 | 69.0 | 6.18e-01 | 88.1% | 64.4% |
| 3217656 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.85 | 69.0 | 6.68e-01 | 86.6% | 78.7% |
| 3465506 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.84 | 67.0 | 6.35e-01 | 88.1% | 72.5% |
| 3990784 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.84 | 68.0 | 5.88e-01 | 86.6% | 58.0% |
| 3431022 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.83 | 70.0 | 6.47e-01 | 91.0% | 74.1% |
| 3233120 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.83 | 70.0 | 6.56e-01 | 89.6% | 76.2% |
| 3577222 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.83 | 65.0 | 7.08e-01 | 83.6% | 100.0% |
| 3941069 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.83 | 67.0 | 5.47e-01 | 86.6% | 55.1% |
| 3425211 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.83 | 71.0 | 6.37e-01 | 92.5% | 71.1% |
| 3662364 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.82 | 69.0 | 6.46e-01 | 91.0% | 75.0% |
| 3625214 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.82 | 68.0 | 5.96e-01 | 88.1% | 64.2% |
| 3936260 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.82 | 65.0 | 6.24e-01 | 83.6% | 77.3% |
| 3246100 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.82 | 68.0 | 6.53e-01 | 89.6% | 78.7% |
| 3419698 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.82 | 67.0 | 6.27e-01 | 86.6% | 77.5% |
| 3425914 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.82 | 69.0 | 6.16e-01 | 91.0% | 66.7% |
| 3431049 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.82 | 70.0 | 6.44e-01 | 92.5% | 74.1% |
| 1165782 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.82 | 63.0 | 5.84e-01 | 80.6% | 67.1% |
| 3799962 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.82 | 68.0 | 6.41e-01 | 89.6% | 75.0% |
| 3435107 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.82 | 70.0 | 6.43e-01 | 92.5% | 72.9% |
| 3434551 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.82 | 70.0 | 6.27e-01 | 92.5% | 74.4% |
| 3599507 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.81 | 63.0 | 6.28e-01 | 83.6% | 80.0% |
| 3992380 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.81 | 68.0 | 6.13e-01 | 91.0% | 71.1% |
| 3432805 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.81 | 69.0 | 6.20e-01 | 92.5% | 75.6% |
| 3622969 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.80 | 62.0 | 6.74e-01 | 83.6% | 100.0% |
| 3924677 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.80 | 66.0 | 5.99e-01 | 89.6% | 68.9% |
| 3225856 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.80 | 65.0 | 6.88e-01 | 88.1% | 98.3% |
| 3375621 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.80 | 68.0 | 6.20e-01 | 91.0% | 74.1% |
| 3338020 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.79 | 68.0 | 5.87e-01 | 94.0% | 71.2% |
| 3822150 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.79 | 67.0 | 6.03e-01 | 92.5% | 71.1% |
| 3806379 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.79 | 65.0 | 6.88e-01 | 89.6% | 100.0% |
| 3665558 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.78 | 66.0 | 6.23e-01 | 89.6% | 76.9% |
| 3791006 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.78 | 63.0 | 5.98e-01 | 88.1% | 72.5% |
| 3295535 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.78 | 66.0 | 6.05e-01 | 92.5% | 71.8% |
| 3319614 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.78 | 66.0 | 6.10e-01 | 92.5% | 75.3% |
| 3356352 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.78 | 64.0 | 6.06e-01 | 91.0% | 75.0% |
| 3216622 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.78 | 66.0 | 5.68e-01 | 91.0% | 63.0% |
| 3502013 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.77 | 64.0 | 6.76e-01 | 89.6% | 100.0% |
| 3214810 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.77 | 69.0 | 6.12e-01 | 98.5% | 73.7% |
| 3190806 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.76 | 62.0 | 6.03e-01 | 95.5% | 79.7% |
| 3878379 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.76 | 67.0 | 6.01e-01 | 95.5% | 73.3% |
| 4003445 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.75 | 58.0 | 5.89e-01 | 82.1% | 92.3% |
| 3669499 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.74 | 60.0 | 5.77e-01 | 91.0% | 78.7% |
| 3370149 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.73 | 62.0 | 5.66e-01 | 94.0% | 78.9% |
| 3830988 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.73 | 61.0 | 5.45e-01 | 92.5% | 72.6% |
| 3506588 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.72 | 58.0 | 5.12e-01 | 88.1% | 70.7% |
| 3352836 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.64 | 43.0 | 3.32e-01 | 71.6% | 52.1% |
| 4451687 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.55 | 42.0 | 2.55e-01 | 83.6% | 85.0% |
D2
high
residues 302-372