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PARG

Euk-Vir

Hemileuca_sp._nucleopolyhedrovirus

PARG__YP_008378315__Hemileuca_sp._nucleopolyhedrovirus__1367203

Identity

Accession:: YP_008378315 ↗
Protein ID:: PARG
Kingdom:: euk

Quality

72.6 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Hemileuca_sp._nucleopolyhedrovirus

TaxID: 1367203

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-96

PDB

D2 medium residues 189-311

PDB

Domain cluster: rep: polyADP-ribose_glycohydrolase__YP_010086971__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D109-212

D3 medium residues 312-352_497-566

PDB

Domain cluster: rep: PARG__YP_009001865__Buzura_suppressaria_nucleopolyhedrovirus__74320__D284-306_409-448_460-526

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1d5rA01	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.57	44.0	3.77e-01	82.0%	85.1%
3tfxA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.53	36.0	2.89e-01	70.3%	99.6%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3234469	7529.1.1.4 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › PARG_cat_C	0.74	68.0	4.97e-01	100.0%	92.6%
4454584	7529.1.1.10 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › AKAP_110	0.73	67.0	5.16e-01	100.0%	95.9%
3919864	7529.1.1.0 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like	0.67	57.0	5.40e-01	91.0%	95.4%
3845321	7529.1.1.10 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › AKAP_110	0.65	56.0	5.44e-01	91.0%	95.0%
None	—		0.62	44.0	3.73e-01	74.8%	61.6%
4972373	7589.1.1.1 ↗	a/b three-layered sandwiches › YgbK-like › YgbK-like › YgbK-like › SBD_N	0.59	47.0	3.65e-01	84.7%	55.5%
5057660	3711.1.1.0 ↗	alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein	0.57	46.0	3.36e-01	84.7%	65.7%
3512458	2007.2.3.2 ↗	a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc	0.53	41.0	3.82e-01	82.9%	88.6%

D4 medium residues 353-496

PDB

Domain cluster: representative

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1njrA00	3.40.220.10	Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1	0.63	53.0	4.44e-01	100.0%	52.2%
4ikcA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.63	45.0	3.60e-01	100.0%	38.0%
2bzlA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.62	49.0	3.95e-01	100.0%	42.6%
8fwpB01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.61	45.0	3.79e-01	98.6%	44.5%
1zc0A00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.60	43.0	3.43e-01	100.0%	36.4%
2i1yA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.60	45.0	3.58e-01	100.0%	38.7%
5fszA00	3.40.220.10	Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1	0.60	55.0	4.51e-01	100.0%	57.6%
4ge6A00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.59	47.0	3.71e-01	100.0%	39.9%
1yguA02	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.59	43.0	3.50e-01	100.0%	39.9%
1a5yA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.59	45.0	3.61e-01	100.0%	40.8%
1wchA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.56	42.0	3.30e-01	100.0%	36.4%
3wfoA01	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.56	34.0	3.32e-01	100.0%	53.5%
3ajaB00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.55	38.0	3.17e-01	99.3%	38.6%
4qunA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.55	40.0	3.28e-01	100.0%	38.9%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2601224	7529.1.1.4 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › PARG_cat_C	0.83	76.0	6.06e-01	100.0%	52.4%
3491231	7529.1.1.4 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › PARG_cat_C	0.81	78.0	6.19e-01	100.0%	55.8%
3607513	7529.1.1.4 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › PARG_cat_C	0.80	75.0	5.98e-01	100.0%	53.4%
3499277	7529.1.1.0 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like	0.72	69.0	4.84e-01	100.0%	62.5%
3253664	7529.1.1.0 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like	0.67	55.0	5.27e-01	100.0%	76.2%
4149038	2011.2.1.3 ↗	a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro	0.62	39.0	3.56e-01	98.6%	47.1%
4250963	2011.2.1.3 ↗	a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro	0.57	39.0	3.52e-01	99.3%	50.5%
3940554	2007.2.3.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II	0.54	43.0	3.44e-01	100.0%	42.4%
3925436	67.1.1.1 ↗	beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C	0.51	30.0	3.46e-01	79.2%	79.0%
3180987	2004.1.1.250 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd	0.50	45.0	3.25e-01	100.0%	65.2%
3483254	2004.1.1.250 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd	0.50	45.0	3.24e-01	100.0%	73.6%
3470159	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.50	45.0	3.34e-01	100.0%	58.5%
3707397	2004.1.1.250 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd	0.50	45.0	3.32e-01	100.0%	59.7%