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PH2015_14_scaffold_1_prodigal-single.1XX__00082

Bact-Vir

PH2015_14_scaffold_1_prodigal-single.1__X__X__00082

Identity

Kingdom:: phage

Quality

76.7 mean pLDDT

Cluster

View cluster (52 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 39-100

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2dyiA02	2.30.30.240	Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain	0.62	42.0	4.08e-01	91.9%	62.0%
4maaA02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.57	39.0	2.93e-01	96.8%	26.5%
3vvlA01	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.53	37.0	2.59e-01	79.0%	53.8%
1vwxA02	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.51	44.0	4.04e-01	96.8%	80.0%
2asfA00	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.50	40.0	3.30e-01	91.9%	72.0%

ECOD (17)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4946152	219.1.1.0 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases	0.75	66.0	4.54e-01	96.8%	37.0%
3920979	223.1.1.71 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains › VGCC_alpha2	0.56	47.0	3.09e-01	96.8%	22.3%
3585652	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.55	39.0	3.96e-01	85.5%	76.7%
3758536	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.55	40.0	3.90e-01	91.9%	70.0%
5074039	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.54	45.0	4.26e-01	100.0%	76.0%
4930563	4.1.1.40 ↗	beta barrels › SH3 › SH3 › SH3 › FeoA	0.54	42.0	4.04e-01	91.9%	74.3%
4643742	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	46.0	4.16e-01	96.8%	78.8%
3374228	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	39.0	4.01e-01	85.5%	81.7%
3624306	4.1.1.18 ↗	beta barrels › SH3 › SH3 › SH3 › CAP_GLY	0.53	46.0	3.70e-01	100.0%	66.4%
3372822	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	42.0	3.94e-01	96.8%	70.7%
3612351	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	37.0	3.55e-01	77.4%	62.7%
3599257	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.52	39.0	3.89e-01	87.1%	76.9%
3630782	4.1.1.51 ↗	beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor	0.51	41.0	3.26e-01	95.2%	46.2%
3450257	4.1.1.150 ↗	beta barrels › SH3 › SH3 › SH3 › DUF3123	0.51	42.0	3.63e-01	91.9%	58.9%
3995092	109.3.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2	0.51	40.0	2.86e-01	91.9%	27.5%
4960540	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.50	39.0	3.88e-01	87.1%	80.0%
3592525	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.50	42.0	3.46e-01	100.0%	51.8%

D2 medium residues 101-261

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1k32A03	3.30.750.44	Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA ›	0.55	26.0	3.66e-01	73.3%	98.6%
3dzaA02	6.10.250.2140	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.52	23.0	3.17e-01	84.5%	93.5%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5063011	219.1.1.36 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92	0.71	55.0	5.02e-01	83.2%	64.0%
4009350	219.1.1.36 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92	0.65	52.0	4.70e-01	82.6%	71.4%