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PH2015_14_scaffold_1_prodigal-single.1__X__X__00091
Bact-VirPH2015_14_scaffold_1_prodigal-single.1__X__X__00091
Identity
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-71
Domain cluster:
rep: IMGVR_UViG_3300013103_000024-3300013103-Ga0164318_1000020537__D18-70
CATH (73)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.81 | 65.0 | 5.43e-01 | 85.5% | 94.4% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.76 | 62.0 | 3.81e-01 | 90.9% | 35.0% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.74 | 58.0 | 4.25e-01 | 85.5% | 79.9% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 57.0 | 4.39e-01 | 85.5% | 46.1% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.72 | 56.0 | 4.74e-01 | 85.5% | 95.7% |
| 3bm4A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.72 | 56.0 | 3.82e-01 | 85.5% | 62.4% |
| 3nv0B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 55.0 | 4.15e-01 | 85.5% | 47.1% |
| 1uliB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 56.0 | 3.93e-01 | 87.3% | 33.9% |
| 4kz1A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.71 | 55.0 | 4.18e-01 | 85.5% | 85.2% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.70 | 51.0 | 4.08e-01 | 76.4% | 83.8% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 47.0 | 3.74e-01 | 70.9% | 66.7% |
| 5tgnA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 53.0 | 4.29e-01 | 85.5% | 45.0% |
| 6ya6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 52.0 | 4.34e-01 | 83.6% | 81.6% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.68 | 54.0 | 3.48e-01 | 90.9% | 34.5% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 51.0 | 4.05e-01 | 85.5% | 40.0% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.67 | 52.0 | 3.65e-01 | 85.5% | 63.5% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 49.0 | 4.33e-01 | 83.6% | 93.0% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 53.0 | 4.62e-01 | 94.5% | 77.8% |
| 3plsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 49.0 | 4.12e-01 | 85.5% | 84.6% |
| 1u4dA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 49.0 | 4.33e-01 | 83.6% | 100.0% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.65 | 50.0 | 3.82e-01 | 87.3% | 50.0% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 46.0 | 3.85e-01 | 76.4% | 77.3% |
| 1gydB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.64 | 49.0 | 3.11e-01 | 87.3% | 19.0% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 49.0 | 3.90e-01 | 87.3% | 50.4% |
| 4kc5C03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.63 | 49.0 | 3.09e-01 | 85.5% | 50.7% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 47.0 | 3.37e-01 | 83.6% | 28.9% |
| 3g8yA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 52.0 | 3.17e-01 | 96.4% | 22.0% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 47.0 | 3.59e-01 | 81.8% | 43.9% |
| 2xzmE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 48.0 | 3.77e-01 | 83.6% | 58.6% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.62 | 51.0 | 3.14e-01 | 94.5% | 25.6% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.62 | 44.0 | 3.57e-01 | 74.5% | 81.1% |
| 1l7aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 51.0 | 3.28e-01 | 100.0% | 22.0% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.62 | 42.0 | 4.16e-01 | 100.0% | 66.7% |
| 3u4vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 49.0 | 3.95e-01 | 90.9% | 62.1% |
| 3d6xB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 42.0 | 3.16e-01 | 72.7% | 58.6% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 49.0 | 4.09e-01 | 90.9% | 83.3% |
| 4fczA00 | 3.10.450.710 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC | 0.61 | 47.0 | 3.41e-01 | 89.1% | 33.9% |
| 3akhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 49.0 | 3.20e-01 | 98.2% | 33.9% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 50.0 | 3.11e-01 | 94.5% | 46.6% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 49.0 | 3.59e-01 | 90.9% | 37.5% |
| 2x8fA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 49.0 | 3.10e-01 | 94.5% | 42.8% |
| 2oc3A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.60 | 53.0 | 3.37e-01 | 100.0% | 63.1% |
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 48.0 | 3.90e-01 | 89.1% | 87.0% |
| 3rmhB00 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 46.0 | 3.50e-01 | 85.5% | 76.7% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 44.0 | 4.08e-01 | 83.6% | 64.0% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 49.0 | 3.31e-01 | 94.5% | 66.1% |
| 1c8uA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 42.0 | 3.07e-01 | 76.4% | 64.7% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 41.0 | 3.95e-01 | 76.4% | 69.2% |
| 3m4uB00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.59 | 50.0 | 3.19e-01 | 98.2% | 36.4% |
| 3nqnA00 | 3.30.530.70 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 | 0.59 | 44.0 | 3.31e-01 | 85.5% | 54.3% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 43.0 | 3.45e-01 | 83.6% | 84.3% |
| 1lc0A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 40.0 | 3.01e-01 | 100.0% | 27.2% |
| 1wuoA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 45.0 | 3.06e-01 | 87.3% | 90.4% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 44.0 | 3.48e-01 | 85.5% | 95.1% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 43.0 | 3.16e-01 | 81.8% | 32.3% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 45.0 | 3.05e-01 | 89.1% | 90.2% |
| 2bvbA00 | 2.60.120.710 | Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 | 0.56 | 39.0 | 3.03e-01 | 74.5% | 35.8% |
| 1zo0A00 | 3.40.630.60 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.56 | 44.0 | 3.52e-01 | 92.7% | 82.5% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 42.0 | 3.03e-01 | 87.3% | 87.2% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 43.0 | 3.17e-01 | 87.3% | 54.4% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 46.0 | 3.05e-01 | 90.9% | 67.4% |
| 6qpwA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 43.0 | 3.28e-01 | 94.5% | 33.3% |
| 3uc2A00 | 2.60.40.3340 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 | 0.55 | 42.0 | 3.52e-01 | 98.2% | 88.7% |
| 5icuA00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 37.0 | 3.13e-01 | 70.9% | 68.6% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.54 | 44.0 | 3.56e-01 | 92.7% | 91.1% |
| 2pmqA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 40.0 | 3.16e-01 | 85.5% | 77.5% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 40.0 | 3.03e-01 | 87.3% | 34.0% |
| 6x5vA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 35.0 | 3.04e-01 | 70.9% | 67.7% |
| 4jhmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 39.0 | 3.19e-01 | 85.5% | 84.6% |
| 4iiqC02 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 41.0 | 3.00e-01 | 94.5% | 78.7% |
| 3pg7A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 42.0 | 3.46e-01 | 100.0% | 78.2% |
| 3jvgA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.50 | 39.0 | 2.99e-01 | 98.2% | 77.5% |
| 3dbxA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.50 | 37.0 | 2.76e-01 | 87.3% | 77.8% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3219433 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.79 | 62.0 | 4.70e-01 | 85.5% | 44.8% |
| 3240258 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.77 | 61.0 | 4.69e-01 | 85.5% | 48.3% |
| 4955652 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.77 | 66.0 | 3.95e-01 | 92.7% | 29.9% |
| 4538255 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.75 | 60.0 | 3.76e-01 | 87.3% | 31.5% |
| 5080416 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.75 | 56.0 | 3.54e-01 | 85.5% | 15.5% |
| 5042475 | 3414.1.1.13 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 | 0.75 | 51.0 | 4.09e-01 | 72.7% | 37.1% |
| 3854465 | 283.2.1.8 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 | 0.73 | 51.0 | 3.92e-01 | 72.7% | 78.3% |
| 162532 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.73 | 57.0 | 3.82e-01 | 85.5% | 59.7% |
| 3219435 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.73 | 56.0 | 3.87e-01 | 85.5% | 28.9% |
| 3284679 | 243.1.1.80 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 | 0.73 | 55.0 | 4.37e-01 | 83.6% | 52.2% |
| 3770448 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.72 | 55.0 | 3.90e-01 | 83.6% | 46.5% |
| 3261242 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.72 | 56.0 | 3.85e-01 | 85.5% | 65.3% |
| 3723546 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.72 | 58.0 | 3.59e-01 | 92.7% | 26.3% |
| 3934831 | 5.1.2.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Apyrase | 0.71 | 55.0 | 3.39e-01 | 83.6% | 15.2% |
| 3742605 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.71 | 63.0 | 3.84e-01 | 100.0% | 54.6% |
| 418817 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.71 | 54.0 | 3.70e-01 | 81.8% | 66.8% |
| 3743551 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.71 | 62.0 | 3.80e-01 | 100.0% | 47.0% |
| 3973776 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.71 | 61.0 | 3.94e-01 | 100.0% | 60.7% |
| 3394227 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.70 | 61.0 | 3.87e-01 | 100.0% | 58.3% |
| 4025559 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.69 | 55.0 | 3.35e-01 | 90.9% | 19.0% |
| 3544987 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.69 | 60.0 | 3.68e-01 | 100.0% | 53.6% |
| 3741046 | 5.1.4.348 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st | 0.69 | 58.0 | 3.49e-01 | 94.5% | 24.3% |
| 1907494 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.69 | 53.0 | 4.29e-01 | 85.5% | 45.0% |
| 3946465 | 5.1.4.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WG_beta_rep | 0.69 | 57.0 | 3.43e-01 | 94.5% | 25.3% |
| 3782550 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.68 | 56.0 | 3.11e-01 | 94.5% | 12.4% |
| 4987019 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.68 | 56.0 | 5.15e-01 | 94.5% | 74.7% |
| 4311344 | 4252.1.1.13 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › PF27123 | 0.68 | 46.0 | 3.64e-01 | 70.9% | 35.7% |
| 4807636 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.68 | 57.0 | 3.53e-01 | 98.2% | 55.9% |
| 5008670 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 54.0 | 3.51e-01 | 89.1% | 35.6% |
| 5018052 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.67 | 57.0 | 3.76e-01 | 98.2% | 65.7% |
| 3722697 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 54.0 | 3.26e-01 | 92.7% | 20.0% |
| 3791433 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.67 | 57.0 | 3.62e-01 | 100.0% | 56.4% |
| 3256260 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 53.0 | 4.34e-01 | 89.1% | 72.4% |
| 3633568 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.66 | 57.0 | 3.54e-01 | 100.0% | 61.5% |
| 3925996 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.66 | 57.0 | 3.58e-01 | 100.0% | 55.8% |
| 3232668 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.65 | 56.0 | 3.57e-01 | 100.0% | 35.3% |
| 4260517 | 243.18.1.0 ↗ | a+b two layers › Cystatin-like › Maltokinase N-terminal domain › Maltokinase N-terminal domain | 0.65 | 56.0 | 3.36e-01 | 100.0% | 20.5% |
| 3992334 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 54.0 | 3.39e-01 | 92.7% | 26.9% |
| 3208004 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 54.0 | 3.11e-01 | 100.0% | 28.2% |
| 4519278 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.65 | 39.0 | 2.39e-01 | 96.4% | 8.7% |
| 3241917 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.64 | 57.0 | 3.62e-01 | 100.0% | 23.5% |
| 3709987 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.64 | 48.0 | 3.66e-01 | 81.8% | 40.8% |
| 4417360 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.64 | 45.0 | 3.12e-01 | 76.4% | 68.2% |
| 3801858 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.64 | 52.0 | 5.11e-01 | 94.5% | 88.3% |
| 3479744 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 54.0 | 3.26e-01 | 96.4% | 23.5% |
| 3936025 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.63 | 50.0 | 4.22e-01 | 90.9% | 82.0% |
| 4107647 | 243.18.1.1 ↗ | a+b two layers › Cystatin-like › Maltokinase N-terminal domain › Maltokinase N-terminal domain › Mak_N_cap | 0.63 | 54.0 | 4.56e-01 | 98.2% | 90.5% |
| 3707978 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.63 | 54.0 | 3.71e-01 | 96.4% | 41.0% |
| 4939185 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 47.0 | 3.75e-01 | 83.6% | 55.0% |
| 3300222 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.63 | 45.0 | 2.74e-01 | 76.4% | 11.7% |
| 4878636 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.62 | 46.0 | 3.14e-01 | 83.6% | 87.7% |
| 5045102 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.62 | 46.0 | 3.91e-01 | 81.8% | 51.6% |
| 3940149 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 46.0 | 3.99e-01 | 83.6% | 76.7% |
| 3257765 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.61 | 48.0 | 3.43e-01 | 87.3% | 48.8% |
| 3720697 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 50.0 | 2.82e-01 | 92.7% | 11.1% |
| 4185867 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.61 | 43.0 | 3.03e-01 | 76.4% | 45.6% |
| 1715836 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.61 | 49.0 | 3.59e-01 | 90.9% | 37.5% |
| 3188984 | 247.1.1.27 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DUF4336 | 0.61 | 47.0 | 3.09e-01 | 90.9% | 95.3% |
| 3619347 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 44.0 | 3.52e-01 | 78.2% | 60.9% |
| 4457054 | 3321.1.1.1 ↗ | a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander | 0.60 | 44.0 | 3.35e-01 | 80.0% | 63.7% |
| 4029733 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 48.0 | 3.81e-01 | 89.1% | 67.0% |
| 2605025 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.59 | 46.0 | 3.12e-01 | 87.3% | 90.0% |
| 3923085 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.59 | 49.0 | 3.13e-01 | 96.4% | 40.3% |
| 3514912 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.58 | 42.0 | 3.93e-01 | 81.8% | 68.0% |
| 4880573 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.58 | 46.0 | 3.17e-01 | 92.7% | 90.2% |
| 3243901 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.58 | 51.0 | 3.19e-01 | 100.0% | 55.5% |
| 3906579 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.57 | 47.0 | 3.64e-01 | 92.7% | 84.0% |
| 3355880 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.56 | 38.0 | 2.37e-01 | 70.9% | 85.4% |
| 3784292 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.56 | 46.0 | 3.01e-01 | 94.5% | 60.8% |
| 141164 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.56 | 43.0 | 3.21e-01 | 87.3% | 56.6% |
| 4607109 | 11.1.1.625 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › OST48_MD | 0.56 | 39.0 | 3.01e-01 | 78.2% | 64.0% |
| 1841031 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.56 | 43.0 | 3.65e-01 | 85.5% | 52.7% |
| 3559665 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.55 | 46.0 | 3.62e-01 | 98.2% | 84.6% |
| 4088781 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.55 | 42.0 | 2.98e-01 | 85.5% | 42.8% |
| 2564088 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.55 | 45.0 | 3.05e-01 | 92.7% | 67.9% |
| 3426652 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.54 | 45.0 | 2.87e-01 | 98.2% | 83.2% |
| 3614613 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 39.0 | 2.92e-01 | 81.8% | 70.6% |
| 5074458 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.54 | 41.0 | 2.99e-01 | 85.5% | 100.0% |
| 5037697 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.53 | 44.0 | 3.02e-01 | 100.0% | 87.0% |
| 4025315 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.52 | 37.0 | 3.10e-01 | 78.2% | 65.5% |
| 3975856 | 2004.1.1.1126 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21, AAA_23, AAA_27 | 0.52 | 38.0 | 2.29e-01 | 78.2% | 91.4% |
| 3459135 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.52 | 39.0 | 3.30e-01 | 89.1% | 54.5% |
| 3923143 | 633.23.1.17 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA | 0.51 | 36.0 | 2.42e-01 | 76.4% | 30.8% |
| 3060581 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.51 | 35.0 | 3.56e-01 | 96.4% | 73.2% |
D2
high
residues 74-151
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25188.1 best | Tad6 | 79.3 | 4.50e-22 | 100.0% | 62.1% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ynjJ02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 32.0 | 3.51e-01 | 83.3% | 69.4% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.48e-01 | 75.6% | 61.3% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.54 | 44.0 | 4.48e-01 | 96.2% | 92.4% |
| 1ko2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 38.0 | 2.79e-01 | 79.5% | 43.0% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 30.0 | 3.47e-01 | 85.9% | 79.3% |
| 2cs7A00 | 3.10.50.90 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 27.0 | 3.06e-01 | 80.8% | 63.6% |
| 2d5wA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.51 | 40.0 | 2.89e-01 | 85.9% | 84.7% |
| 2jc4A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.51 | 38.0 | 2.70e-01 | 80.8% | 66.0% |
| 2hq4A00 | 3.40.1600.10 | Alpha Beta › 3-Layer(aba) Sandwich › PH1570-like fold › PH1570-like | 0.50 | 35.0 | 2.90e-01 | 74.4% | 98.1% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.50 | 37.0 | 3.19e-01 | 80.8% | 94.0% |
| 1v1aA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 42.0 | 2.89e-01 | 96.2% | 85.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3541285 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.59 | 29.0 | 3.27e-01 | 80.8% | 58.3% |
| 3938492 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.58 | 29.0 | 3.57e-01 | 82.1% | 80.0% |
| 3618014 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.55 | 28.0 | 3.51e-01 | 74.4% | 84.4% |
| 3704674 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.54 | 38.0 | 2.48e-01 | 73.1% | 91.1% |
| 4028185 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.53 | 26.0 | 3.15e-01 | 79.5% | 70.0% |
| 5048348 | 3080.1.1.0 ↗ | a+b complex topology › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins | 0.51 | 45.0 | 3.36e-01 | 100.0% | 43.5% |
| 4668024 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.51 | 43.0 | 3.17e-01 | 94.9% | 39.5% |
| 3717071 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.50 | 34.0 | 2.27e-01 | 70.5% | 88.5% |