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PH2015_14_scaffold_1_prodigal-single.1__X__X__00119

Bact-Vir

PH2015_14_scaffold_1_prodigal-single.1__X__X__00119

Identity

Kingdom:
phage

Quality

58.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-131
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2z15A00 3.90.640.90 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Anti-proliferative protein, N-terminal domain 0.57 38.0 3.88e-01 75.0% 68.1%
3d8lA00 1.10.8.940 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein, phage p2 ORF12 0.53 32.0 3.61e-01 86.7% 79.1%
3au5A03 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.51 28.0 2.96e-01 74.2% 56.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4003844 148.1.3.22 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_5 0.64 40.0 4.21e-01 89.2% 68.2%
3505845 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.60 25.0 2.79e-01 89.2% 45.0%
4947770 212.1.1.18 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Lon_C 0.57 32.0 3.17e-01 94.2% 50.0%
4930113 102.1.2.37 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › T1RH-like_C 0.54 31.0 3.46e-01 71.7% 71.9%
1770995 223.2.1.8 a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.51 41.0 3.52e-01 87.5% 98.0%
3361880 101.1.17.41 alpha arrays › HTH › HTH › FF domain › AdoHcyase 0.50 28.0 3.16e-01 88.3% 68.4%
D2 high residues 137-270
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14284.12 best PcfJ 38.5 1.60e-09 57.5% 45.8%