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PH2015_14_scaffold_1_prodigal-single.1__X__X__00119
Bact-VirPH2015_14_scaffold_1_prodigal-single.1__X__X__00119
Identity
- Kingdom:
- phage
Quality
58.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-131
Domain cluster:
rep: SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00519__D1-129
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z15A00 | 3.90.640.90 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Anti-proliferative protein, N-terminal domain | 0.57 | 38.0 | 3.88e-01 | 75.0% | 68.1% |
| 3d8lA00 | 1.10.8.940 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein, phage p2 ORF12 | 0.53 | 32.0 | 3.61e-01 | 86.7% | 79.1% |
| 3au5A03 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.51 | 28.0 | 2.96e-01 | 74.2% | 56.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4003844 | 148.1.3.22 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_5 | 0.64 | 40.0 | 4.21e-01 | 89.2% | 68.2% |
| 3505845 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.60 | 25.0 | 2.79e-01 | 89.2% | 45.0% |
| 4947770 | 212.1.1.18 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Lon_C | 0.57 | 32.0 | 3.17e-01 | 94.2% | 50.0% |
| 4930113 | 102.1.2.37 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › T1RH-like_C | 0.54 | 31.0 | 3.46e-01 | 71.7% | 71.9% |
| 1770995 | 223.2.1.8 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin | 0.51 | 41.0 | 3.52e-01 | 87.5% | 98.0% |
| 3361880 | 101.1.17.41 ↗ | alpha arrays › HTH › HTH › FF domain › AdoHcyase | 0.50 | 28.0 | 3.16e-01 | 88.3% | 68.4% |
D2
high
residues 137-270
Domain cluster:
rep: KU935715.1__AND75289.1__ME3_128__00128__D432-531
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14284.12 best | PcfJ | 38.5 | 1.60e-09 | 57.5% | 45.8% |