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PH2015_14_scaffold_1_prodigal-single.1__X__X__00123

Bact-Vir

PH2015_14_scaffold_1_prodigal-single.1__X__X__00123

Identity

Kingdom:
phage

Quality

71.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-151
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fpwA01 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.78 63.0 6.88e-01 88.5% 100.0%
4nkpA01 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.77 65.0 6.97e-01 91.2% 100.0%
2a2lC00 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.76 67.0 6.81e-01 92.6% 93.7%
6bwsB00 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.76 65.0 6.77e-01 89.9% 96.4%
4clcA00 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.68 60.0 5.71e-01 92.6% 81.1%
3fwlA02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.66 59.0 4.31e-01 96.6% 77.5%
3udfA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.66 58.0 4.37e-01 96.6% 82.7%
7rd0A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.64 54.0 4.22e-01 91.9% 100.0%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.63 47.0 5.22e-01 91.9% 100.0%
6kbyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.63 55.0 4.19e-01 96.6% 98.6%
1skoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.62 47.0 5.23e-01 93.2% 100.0%
3gfhA01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.62 28.0 3.26e-01 93.2% 56.4%
6kjcA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.62 53.0 3.89e-01 93.2% 96.6%
5w1eA01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.62 55.0 5.03e-01 93.9% 98.9%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.62 47.0 5.21e-01 95.9% 100.0%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.62 47.0 5.14e-01 90.5% 100.0%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.62 52.0 5.42e-01 96.6% 100.0%
4p6bB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.61 52.0 3.91e-01 92.6% 100.0%
2g7uC02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 54.0 5.09e-01 95.3% 97.2%
4lrzE01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 54.0 5.10e-01 95.9% 79.2%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.61 31.0 3.74e-01 95.9% 71.6%
2xrnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 54.0 5.08e-01 95.3% 94.4%
1skoA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.61 46.0 5.06e-01 95.3% 99.2%
6kjhA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.60 52.0 3.96e-01 93.9% 100.0%
3d3oA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.60 53.0 5.02e-01 95.9% 96.6%
1w5dA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.60 52.0 4.38e-01 93.2% 100.0%
4hesA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 52.0 4.27e-01 95.9% 99.3%
2axyA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.59 26.0 3.64e-01 93.9% 84.7%
4r70B01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.58 52.0 4.70e-01 97.3% 71.4%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 35.0 4.29e-01 84.5% 97.8%
3cjmA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 51.0 4.26e-01 96.6% 98.8%
4bwiB01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.57 51.0 4.69e-01 96.6% 85.4%
3v3sA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 49.0 4.01e-01 92.6% 99.6%
3qtdA01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.57 31.0 2.65e-01 91.2% 34.6%
3hlbD00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 49.0 3.70e-01 97.3% 99.0%
2j3wC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 43.0 4.48e-01 85.8% 87.4%
4ewfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 49.0 4.05e-01 97.3% 98.9%
3tu3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 26.0 2.84e-01 95.9% 51.3%
5l09B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.55 49.0 4.77e-01 99.3% 100.0%
1e3uD00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 46.0 3.92e-01 90.5% 99.6%
4iedA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.54 45.0 3.90e-01 91.2% 100.0%
4ew7A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 38.0 4.28e-01 82.4% 100.0%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.50 44.0 4.27e-01 96.6% 87.1%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1098285 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.77 64.0 6.52e-01 91.9% 87.7%
4010080 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.77 64.0 6.75e-01 91.9% 95.5%
6884 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.76 66.0 6.80e-01 90.5% 93.7%
1124917 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.76 65.0 6.61e-01 91.9% 90.3%
4962077 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.75 67.0 6.97e-01 93.9% 98.6%
3736817 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.75 66.0 6.82e-01 92.6% 97.1%
3974762 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.75 64.0 6.59e-01 89.2% 93.6%
3724976 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.74 64.0 6.41e-01 89.9% 88.7%
3972702 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.73 65.0 6.62e-01 91.9% 95.1%
3977743 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.73 64.0 6.54e-01 93.2% 93.8%
4097920 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.70 60.0 5.80e-01 90.5% 80.6%
4447297 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.69 59.0 5.90e-01 92.6% 87.6%
3167512 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.69 61.0 5.75e-01 97.3% 80.0%
4960551 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.68 53.0 5.50e-01 96.6% 86.4%
5049672 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.68 49.0 5.60e-01 93.2% 99.1%
4467423 223.6.1.1 a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like 0.68 58.0 5.71e-01 92.6% 85.8%
5048642 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.67 53.0 5.77e-01 95.9% 99.2%
3953538 4019.1.1.1 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.67 59.0 4.33e-01 95.3% 93.0%
4980137 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.67 53.0 5.74e-01 96.6% 100.0%
5052689 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.67 53.0 5.74e-01 96.6% 100.0%
4943309 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 49.0 5.52e-01 92.6% 100.0%
5079224 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.66 50.0 5.53e-01 91.9% 100.0%
4972248 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 54.0 5.77e-01 95.3% 100.0%
4938938 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 52.0 5.63e-01 97.3% 100.0%
4970750 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 50.0 5.46e-01 93.9% 99.2%
5072860 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 46.0 5.18e-01 93.9% 93.9%
5000860 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.65 54.0 5.73e-01 95.9% 100.0%
4979300 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 53.0 5.66e-01 95.9% 100.0%
5045566 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 45.0 5.23e-01 91.2% 100.0%
5052178 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.65 47.0 5.33e-01 86.5% 100.0%
5050326 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 52.0 5.55e-01 95.3% 100.0%
5049782 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 53.0 5.57e-01 100.0% 97.0%
5050348 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.64 52.0 5.40e-01 95.9% 92.6%
4929358 223.2.1.62 a+b three layers › Profilin-like › profilin-like › profilin-like › DUF6659 0.64 50.0 5.48e-01 88.5% 100.0%
4977878 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.64 49.0 5.34e-01 93.9% 99.2%
5052344 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 51.0 5.37e-01 93.9% 95.4%
5046009 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 51.0 5.45e-01 96.6% 97.7%
5073955 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 47.0 5.13e-01 94.6% 93.3%
5050157 223.2.1.12 a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.63 51.0 5.08e-01 95.9% 83.3%
4979842 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 47.0 5.08e-01 95.9% 92.0%
4957253 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.63 50.0 5.37e-01 96.6% 100.0%
3924796 223.2.1.12 a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.63 47.0 5.19e-01 93.9% 99.1%
3215570 223.2.1.12 a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.63 48.0 5.26e-01 95.9% 99.2%
4945992 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 49.0 5.25e-01 95.9% 94.6%
5046813 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 47.0 5.25e-01 89.2% 100.0%
4927500 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 52.0 5.47e-01 95.9% 97.0%
3965700 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.63 48.0 5.28e-01 94.6% 100.0%
5049758 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.63 51.0 5.22e-01 95.9% 88.3%
5050494 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.63 49.0 5.26e-01 95.9% 94.6%
4943133 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 51.0 5.38e-01 96.6% 97.7%
4972333 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 49.0 5.27e-01 95.9% 96.8%
5069834 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.62 47.0 5.22e-01 92.6% 100.0%
4884064 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.62 48.0 5.28e-01 93.9% 100.0%
4976003 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.62 51.0 5.39e-01 95.9% 99.2%
4991121 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 47.0 5.18e-01 92.6% 100.0%
5050684 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 44.0 4.97e-01 94.6% 97.3%
4458271 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.62 55.0 4.26e-01 94.6% 73.2%
4972247 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 49.0 5.16e-01 96.6% 95.4%
5076907 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 51.0 5.27e-01 95.9% 97.0%
4975639 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 50.0 5.32e-01 95.9% 100.0%
3166061 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.61 54.0 4.20e-01 93.9% 64.9%
4979666 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.61 45.0 5.07e-01 92.6% 100.0%
3973805 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.61 53.0 4.19e-01 94.6% 67.5%
3250283 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.60 50.0 5.32e-01 95.3% 100.0%
5074161 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.60 49.0 5.23e-01 96.6% 100.0%
4984610 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.60 48.0 5.20e-01 96.6% 100.0%
5043790 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.60 48.0 5.14e-01 92.6% 98.4%
5079496 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 45.0 4.99e-01 89.2% 100.0%
5049690 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 50.0 5.19e-01 96.6% 96.4%
5027564 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 48.0 4.83e-01 95.3% 84.7%
5045484 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.60 47.0 5.05e-01 92.6% 98.4%
4002901 223.2.1.12 a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.59 47.0 4.80e-01 97.3% 88.6%
3699801 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 50.0 5.21e-01 93.9% 96.4%
4998444 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.59 50.0 5.24e-01 94.6% 99.3%
5079191 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.59 48.0 5.10e-01 96.6% 98.5%
5076116 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.59 49.0 5.08e-01 97.3% 96.4%
4672684 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.59 50.0 4.12e-01 92.6% 99.6%
3972969 272.1.1.0 a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain 0.57 31.0 3.78e-01 96.6% 81.1%
4984107 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.57 45.0 4.78e-01 94.6% 96.2%
5048714 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.57 49.0 5.10e-01 95.9% 99.3%
3368757 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.55 28.0 3.40e-01 93.2% 74.7%
4251848 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 44.0 4.48e-01 85.8% 97.2%
4042767 223.1.1.103 a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE7, PF30448 0.55 33.0 3.51e-01 78.4% 65.9%
4380266 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 41.0 3.55e-01 81.8% 54.8%
5065450 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 41.0 4.06e-01 83.1% 83.2%