←Back to structures
PH2015_14_scaffold_1_prodigal-single.1__X__X__00166
Bact-VirPH2015_14_scaffold_1_prodigal-single.1__X__X__00166
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 64-183
Domain cluster:
rep: IMGVR_UViG_3300006894_000039-3300006894-Ga0079215_1000005620__D114-216
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vhqU01 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.82 | 68.0 | 7.10e-01 | 100.0% | 93.6% |
| 1winA01 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.81 | 71.0 | 7.22e-01 | 100.0% | 94.9% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.78 | 30.0 | 4.91e-01 | 100.0% | 95.7% |
| 2rpbA00 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.77 | 62.0 | 6.36e-01 | 100.0% | 89.4% |
| 2zuoA10 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.75 | 66.0 | 6.85e-01 | 100.0% | 98.2% |
| 3pu9A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.74 | 47.0 | 3.73e-01 | 98.3% | 32.8% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.71 | 28.0 | 2.90e-01 | 100.0% | 37.3% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.68 | 28.0 | 3.01e-01 | 100.0% | 43.1% |
| 5f1mA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.66 | 48.0 | 3.78e-01 | 98.3% | 35.8% |
| 2pk0A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.66 | 48.0 | 3.77e-01 | 98.3% | 36.8% |
| 2daxA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.62 | 35.0 | 3.37e-01 | 90.8% | 46.8% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.61 | 47.0 | 3.52e-01 | 100.0% | 33.0% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.58 | 26.0 | 3.18e-01 | 100.0% | 64.9% |
| 2ebkA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 34.0 | 3.39e-01 | 89.2% | 55.5% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.56 | 35.0 | 3.43e-01 | 99.2% | 55.1% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.54 | 37.0 | 3.39e-01 | 90.8% | 51.2% |
| 1z5bB03 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.53 | 37.0 | 3.52e-01 | 90.0% | 59.1% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947843 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.88 | 77.0 | 7.61e-01 | 100.0% | 87.2% |
| 5069131 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.87 | 71.0 | 6.90e-01 | 100.0% | 77.7% |
| 3523996 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.87 | 71.0 | 7.26e-01 | 100.0% | 87.8% |
| 3260338 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.87 | 71.0 | 7.00e-01 | 100.0% | 80.8% |
| 3500570 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.87 | 70.0 | 6.45e-01 | 100.0% | 67.3% |
| 3312228 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.87 | 72.0 | 6.91e-01 | 100.0% | 77.0% |
| 5001545 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.86 | 70.0 | 6.72e-01 | 100.0% | 74.8% |
| 4932838 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.86 | 70.0 | 7.06e-01 | 100.0% | 84.2% |
| 3605179 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.86 | 72.0 | 6.34e-01 | 100.0% | 63.0% |
| 3700069 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.86 | 71.0 | 7.24e-01 | 100.0% | 88.7% |
| 3569209 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.86 | 70.0 | 7.16e-01 | 100.0% | 87.8% |
| 4977988 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.86 | 70.0 | 6.67e-01 | 100.0% | 74.8% |
| 4944483 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.86 | 69.0 | 6.75e-01 | 100.0% | 77.7% |
| 4941790 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.85 | 70.0 | 6.58e-01 | 100.0% | 72.9% |
| 3227676 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.85 | 68.0 | 6.12e-01 | 100.0% | 63.1% |
| 4991921 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.84 | 68.0 | 6.03e-01 | 100.0% | 61.2% |
| 3496975 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.84 | 68.0 | 6.62e-01 | 100.0% | 77.7% |
| 5010097 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.84 | 73.0 | 7.44e-01 | 100.0% | 94.8% |
| 4946531 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.84 | 73.0 | 7.20e-01 | 100.0% | 87.2% |
| 3795433 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.84 | 69.0 | 6.73e-01 | 100.0% | 79.2% |
| 3937096 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.84 | 69.0 | 6.95e-01 | 100.0% | 85.8% |
| 3487126 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.84 | 70.0 | 6.67e-01 | 100.0% | 77.0% |
| 3289226 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.83 | 73.0 | 7.44e-01 | 100.0% | 94.8% |
| 4649099 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.83 | 69.0 | 6.30e-01 | 100.0% | 68.7% |
| 5054328 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.83 | 61.0 | 6.78e-01 | 100.0% | 94.7% |
| 4944893 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.83 | 72.0 | 6.99e-01 | 100.0% | 83.8% |
| 5012808 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.82 | 71.0 | 6.51e-01 | 100.0% | 72.7% |
| 4447629 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.82 | 69.0 | 6.62e-01 | 100.0% | 78.5% |
| 5028291 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.82 | 59.0 | 6.66e-01 | 100.0% | 94.7% |
| 5070793 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.81 | 59.0 | 6.62e-01 | 100.0% | 94.7% |
| 5059432 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.81 | 71.0 | 7.10e-01 | 100.0% | 90.8% |
| 5058702 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.81 | 72.0 | 6.89e-01 | 100.0% | 83.7% |
| 4945969 | 230.6.1.0 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain | 0.80 | 58.0 | 6.34e-01 | 100.0% | 90.0% |
| 3728098 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.80 | 75.0 | 6.89e-01 | 100.0% | 84.7% |
| 4970323 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.80 | 71.0 | 7.02e-01 | 100.0% | 90.4% |
| 5057792 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.79 | 58.0 | 6.45e-01 | 100.0% | 94.7% |
| 4988943 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.79 | 58.0 | 6.02e-01 | 100.0% | 81.8% |
| 5055024 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.79 | 57.0 | 6.38e-01 | 100.0% | 94.7% |
| 4025984 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.79 | 71.0 | 7.16e-01 | 100.0% | 94.2% |
| 5027891 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.79 | 57.0 | 6.37e-01 | 100.0% | 94.7% |
| 4460725 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.79 | 57.0 | 6.36e-01 | 100.0% | 94.7% |
| 4984761 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.79 | 57.0 | 6.35e-01 | 100.0% | 94.7% |
| 5046273 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.79 | 57.0 | 5.89e-01 | 100.0% | 78.9% |
| 5035388 | 230.5.1.4 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 | 0.78 | 71.0 | 6.70e-01 | 100.0% | 82.9% |
| 4398398 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.78 | 74.0 | 6.64e-01 | 100.0% | 75.6% |
| 4462188 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.78 | 56.0 | 5.80e-01 | 100.0% | 78.3% |
| 4983144 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.77 | 58.0 | 6.18e-01 | 100.0% | 88.6% |
| 3275852 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.77 | 73.0 | 6.62e-01 | 100.0% | 88.4% |
| 4996557 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.75 | 64.0 | 6.55e-01 | 100.0% | 95.7% |
| 3719141 | 230.5.1.2 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder | 0.73 | 67.0 | 4.99e-01 | 100.0% | 43.4% |
| 3595900 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.72 | 66.0 | 4.83e-01 | 100.0% | 40.4% |
| 3718698 | 230.5.1.2 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder | 0.72 | 65.0 | 4.77e-01 | 100.0% | 39.0% |
| 3501639 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.72 | 62.0 | 6.06e-01 | 100.0% | 84.6% |
| 3968121 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.71 | 67.0 | 6.02e-01 | 100.0% | 90.6% |
| 3599357 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.71 | 67.0 | 6.75e-01 | 100.0% | 100.0% |
| 3531258 | 230.5.1.2 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder | 0.70 | 66.0 | 6.34e-01 | 100.0% | 92.6% |
| 4993863 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.59 | 37.0 | 3.90e-01 | 99.2% | 69.1% |
| 4938668 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.58 | 37.0 | 4.01e-01 | 100.0% | 74.3% |
| 5028215 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.58 | 36.0 | 3.96e-01 | 100.0% | 75.0% |
| 4942059 | 212.1.1.18 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Lon_C | 0.56 | 35.0 | 3.86e-01 | 100.0% | 76.0% |
| 4930685 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.55 | 34.0 | 3.10e-01 | 88.3% | 44.4% |
| 3623034 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.53 | 35.0 | 3.08e-01 | 88.3% | 42.1% |
D2
medium
residues 185-218
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 64.0 | 5.18e-01 | 100.0% | 69.7% |
| 3k59A06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.71 | 60.0 | 5.44e-01 | 97.1% | 72.3% |
| 1cp9A02 | 1.10.287.150 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 49.0 | 5.01e-01 | 94.1% | 100.0% |
| 3dwlG00 | 1.25.40.190 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Actin-related protein 2/3 complex subunit 5 | 0.64 | 51.0 | 3.67e-01 | 100.0% | 61.4% |
| 4ar9A02 | 1.10.390.20 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › | 0.64 | 49.0 | 3.39e-01 | 97.1% | 23.9% |
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.61 | 49.0 | 3.98e-01 | 97.1% | 66.2% |
| 1kaeA03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 47.0 | 4.17e-01 | 100.0% | 58.2% |
| 1pv0A01 | 1.10.287.1100 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Sporulation inhibitor A | 0.59 | 43.0 | 4.37e-01 | 88.2% | 85.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035654 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.71 | 52.0 | 3.02e-01 | 97.1% | 7.8% |
| 4225860 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.66 | 51.0 | 3.14e-01 | 97.1% | 15.0% |
| 4325353 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.64 | 49.0 | 3.05e-01 | 97.1% | 14.6% |
| 4257658 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.62 | 45.0 | 3.00e-01 | 97.1% | 18.5% |