←Back to structures
PH2015_14_scaffold_1_prodigal-single.1__X__X__00224
Bact-VirPH2015_14_scaffold_1_prodigal-single.1__X__X__00224
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-199
Domain cluster:
rep: ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00352__D40-229
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.77 | 48.0 | 5.92e-01 | 98.9% | 96.6% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.73 | 51.0 | 6.00e-01 | 98.4% | 100.0% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.72 | 64.0 | 6.08e-01 | 100.0% | 81.4% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.71 | 39.0 | 5.20e-01 | 98.9% | 99.0% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.71 | 50.0 | 5.73e-01 | 100.0% | 97.1% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.69 | 47.0 | 5.52e-01 | 98.4% | 99.2% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.68 | 49.0 | 5.55e-01 | 98.9% | 96.5% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.68 | 39.0 | 4.79e-01 | 100.0% | 90.3% |
| 2w7vA00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.67 | 31.0 | 4.39e-01 | 96.2% | 95.1% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.55 | 45.0 | 3.61e-01 | 89.7% | 44.7% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.54 | 37.0 | 4.22e-01 | 97.3% | 94.2% |
| 3igqC00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.53 | 34.0 | 3.48e-01 | 91.3% | 63.6% |
| 5mmjj00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 28.0 | 3.56e-01 | 83.7% | 89.9% |
| 2i4lA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 46.0 | 3.72e-01 | 98.4% | 81.8% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970985 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.79 | 59.0 | 6.67e-01 | 99.5% | 100.0% |
| 5004177 | 304.124.1.3 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 | 0.79 | 53.0 | 6.35e-01 | 98.4% | 100.0% |
| 3948250 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.76 | 60.0 | 6.45e-01 | 100.0% | 96.1% |
| 4034595 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.76 | 49.0 | 6.02e-01 | 97.3% | 100.0% |
| 5454 | 304.124.1.2 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Gp37 | 0.71 | 50.0 | 5.77e-01 | 100.0% | 98.5% |
| 3589225 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.70 | 51.0 | 5.85e-01 | 99.5% | 100.0% |
| 4928893 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.70 | 53.0 | 5.87e-01 | 98.9% | 98.6% |
| 4888780 | 304.124.1.5 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › T4-gp15_tss | 0.69 | 65.0 | 5.98e-01 | 100.0% | 82.1% |
| 5083619 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.68 | 51.0 | 5.69e-01 | 98.9% | 98.6% |
| 3585212 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.67 | 63.0 | 5.97e-01 | 100.0% | 91.6% |
| 5040945 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.67 | 53.0 | 5.80e-01 | 99.5% | 99.3% |
| 3497298 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.59 | 34.0 | 3.83e-01 | 82.6% | 72.1% |
| 3977799 | 304.109.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › YecR | 0.58 | 28.0 | 3.96e-01 | 89.1% | 96.5% |
| 147643 | 522.1.1.1 ↗ | a+b two layers › Bacteriochlorophyll A protein › Bacteriochlorophyll A protein › Bacteriochlorophyll A protein › BChl_A | 0.55 | 45.0 | 3.61e-01 | 89.7% | 44.7% |
| 3734648 | 11.1.1.668 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAPPC13_M | 0.54 | 33.0 | 3.69e-01 | 73.4% | 75.8% |
| 3523342 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.52 | 37.0 | 3.83e-01 | 92.9% | 75.0% |
| 4417323 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.51 | 46.0 | 3.87e-01 | 98.4% | 81.3% |
| 3700802 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.50 | 31.0 | 3.47e-01 | 95.1% | 77.2% |