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PH2015_14_scaffold_1_prodigal-single.1__X__X__00252
Bact-VirPH2015_14_scaffold_1_prodigal-single.1__X__X__00252
Identity
- Kingdom:
- phage
Quality
56.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 419-520
Domain cluster:
rep: MN871446.1__UKS71963.1__KpLz245_0970__00097__D488-572
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 46.0 | 4.55e-01 | 100.0% | 76.4% |
| 1dabA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.56 | 47.0 | 3.01e-01 | 94.1% | 18.9% |
| 2bk8A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 35.0 | 3.65e-01 | 91.2% | 68.0% |
| 1bozA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.51 | 36.0 | 2.94e-01 | 71.6% | 98.9% |
| 1fhgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.48e-01 | 90.2% | 69.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4637253 | 207.2.1.58 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP+ChlamPMP_M | 0.63 | 52.0 | 3.22e-01 | 90.2% | 22.0% |
| 3569874 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.63 | 50.0 | 4.80e-01 | 84.3% | 91.3% |
| 3886066 | 11.1.1.588 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fibulin_C | 0.58 | 37.0 | 3.46e-01 | 84.3% | 52.0% |
| 3713407 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 38.0 | 3.97e-01 | 89.2% | 77.9% |
| 4443031 | 207.2.1.10 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin | 0.55 | 46.0 | 2.94e-01 | 94.1% | 18.7% |
| 3286167 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 3.84e-01 | 92.2% | 95.8% |
| 3517885 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.51 | 37.0 | 3.16e-01 | 100.0% | 44.4% |
| 3088296 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.50 | 37.0 | 3.01e-01 | 76.5% | 70.2% |
D2
medium
residues 308-368_386-398