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PH2015_18_scaffold_2_prodigal-single.1__X__X__00017
Bact-VirPH2015_18_scaffold_2_prodigal-single.1__X__X__00017
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-131
Domain cluster:
rep: BML_08182015_1_5m_scaffold_1_prodigal-single.1__X__X__00031__D2-161
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.66 | 27.0 | 3.21e-01 | 83.8% | 54.0% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 32.0 | 3.46e-01 | 97.7% | 61.4% |
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.56 | 39.0 | 4.10e-01 | 97.7% | 79.8% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 29.0 | 3.27e-01 | 94.6% | 64.4% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.53 | 31.0 | 3.28e-01 | 86.9% | 63.1% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 29.0 | 3.13e-01 | 94.6% | 66.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3081033 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.57 | 31.0 | 3.17e-01 | 90.8% | 53.5% |
| 2879003 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 34.0 | 3.73e-01 | 93.8% | 78.7% |
| 5047697 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 36.0 | 3.72e-01 | 90.8% | 77.6% |