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PH2015_18_scaffold_2_prodigal-single.1__X__X__00078

Bact-Vir

PH2015_18_scaffold_2_prodigal-single.1__X__X__00078

Identity

Kingdom:
phage

Quality

91.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-154
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00856.34 best SET 48.6 1.40e-12 58.7% 97.1%
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ynmB00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.88 72.0 6.43e-01 84.0% 73.5%
2rfiB00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.85 69.0 5.63e-01 83.3% 54.8%
4qenA03 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.85 70.0 5.65e-01 84.7% 85.3%
5vacA00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.85 64.0 5.58e-01 78.0% 84.7%
3bo5A00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.85 70.0 5.62e-01 86.0% 59.9%
6a5kA03 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.84 69.0 5.54e-01 84.7% 58.2%
2w5yA01 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.84 70.0 6.90e-01 84.7% 89.7%
1ml9A00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.84 61.0 4.90e-01 73.3% 55.4%
1zkkB00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.79 64.0 6.26e-01 84.0% 87.0%
3qxyA01 3.90.1410.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 1 › set domain protein methyltransferase, domain 1 0.77 58.0 4.75e-01 76.7% 93.7%
5lszA00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.77 73.0 6.05e-01 99.3% 62.6%
3db5A00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.76 54.0 5.88e-01 92.0% 87.1%
4rz0A00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.76 56.0 6.41e-01 85.3% 100.0%
3rq4A02 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.75 59.0 6.08e-01 82.0% 97.9%
3ep0A00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.74 53.0 6.10e-01 92.0% 96.5%
3ihxC01 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.74 55.0 6.12e-01 98.7% 95.0%
3n71A01 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.72 43.0 5.50e-01 86.7% 96.8%
6ictA01 3.90.1410.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 1 › set domain protein methyltransferase, domain 1 0.72 58.0 4.50e-01 84.7% 78.6%
4ldgA00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.70 60.0 5.21e-01 96.0% 61.6%
4mi0A00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.70 54.0 4.77e-01 92.7% 57.2%
3ru0A01 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.70 58.0 6.18e-01 87.3% 99.3%
1mvhA00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.69 60.0 4.82e-01 95.3% 50.2%
3dalA00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.68 59.0 5.54e-01 90.7% 78.8%
2h21B01 3.90.1410.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 1 › set domain protein methyltransferase, domain 1 0.68 55.0 4.50e-01 83.3% 93.3%
3rayA00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.67 57.0 5.63e-01 98.7% 84.3%
2f0cA02 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.51 32.0 3.74e-01 94.0% 90.4%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4942312 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.92 86.0 8.41e-01 96.7% 98.1%
4981621 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.88 85.0 8.21e-01 100.0% 98.2%
3931363 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.87 71.0 6.90e-01 84.7% 89.0%
3684535 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.87 71.0 6.13e-01 84.7% 67.9%
4030291 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.87 70.0 6.25e-01 83.3% 85.5%
3743917 70.3.1.8 beta barrels › beta-clip › SET domain-like › SET domain-like › SET+N-SET 0.86 71.0 6.09e-01 84.7% 65.5%
3229357 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.86 70.0 6.58e-01 83.3% 86.9%
3479005 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.86 71.0 6.96e-01 84.7% 91.1%
3435068 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.86 71.0 5.76e-01 84.7% 70.4%
3285899 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.86 70.0 7.38e-01 83.3% 100.0%
3641451 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.86 71.0 6.57e-01 84.7% 84.9%
3807196 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.86 70.0 5.55e-01 84.7% 83.9%
3795311 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.86 71.0 6.42e-01 86.0% 77.4%
3801432 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.86 70.0 6.22e-01 84.7% 84.3%
3358841 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.86 71.0 6.18e-01 86.0% 68.4%
3628408 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.86 71.0 6.50e-01 85.3% 79.5%
4029386 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.85 70.0 5.75e-01 84.7% 60.6%
3601100 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.85 81.0 7.46e-01 99.3% 83.2%
3991819 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.85 70.0 5.69e-01 84.7% 60.8%
3467859 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.85 64.0 6.14e-01 76.7% 86.7%
3243276 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.85 71.0 6.02e-01 86.7% 80.3%
3790011 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.85 72.0 6.14e-01 88.0% 68.0%
3168623 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.85 72.0 5.83e-01 88.0% 57.3%
3516459 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.85 68.0 6.10e-01 83.3% 81.0%
3300075 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.85 71.0 6.04e-01 86.7% 92.4%
3997440 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.84 69.0 6.02e-01 84.7% 69.5%
3805692 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.84 68.0 5.72e-01 83.3% 68.1%
3489471 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.84 70.0 6.31e-01 86.0% 87.2%
3213216 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.84 68.0 6.34e-01 83.3% 85.0%
3720868 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.84 68.0 5.65e-01 83.3% 96.2%
3594869 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.84 74.0 7.29e-01 93.3% 100.0%
3198522 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.84 67.0 5.91e-01 83.3% 84.8%
3700733 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.83 77.0 6.89e-01 96.7% 74.5%
3459886 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.83 68.0 5.61e-01 84.0% 73.8%
3255283 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.83 64.0 4.53e-01 79.3% 32.0%
3246496 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.83 65.0 5.42e-01 81.3% 69.4%
3248373 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.83 68.0 5.64e-01 84.7% 82.9%
3842741 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.82 68.0 5.73e-01 84.7% 73.2%
4017765 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.82 60.0 5.77e-01 74.0% 91.5%
3940609 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.82 66.0 5.93e-01 83.3% 87.0%
4210245 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.82 62.0 6.25e-01 78.0% 87.3%
3554684 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.81 62.0 5.77e-01 78.0% 72.8%
3671627 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.81 67.0 5.64e-01 86.0% 67.4%
3609570 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.80 75.0 7.01e-01 98.7% 83.9%
3512016 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.80 65.0 6.02e-01 84.7% 84.3%
4949565 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.80 59.0 6.51e-01 76.0% 99.2%
3240228 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.80 67.0 6.53e-01 86.7% 87.5%
3597944 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.80 74.0 6.90e-01 98.0% 82.8%
3930039 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.80 66.0 6.48e-01 86.0% 90.6%
3195285 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.79 63.0 5.19e-01 82.0% 72.4%
4016856 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.79 63.0 5.19e-01 81.3% 78.4%
3190685 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.79 61.0 5.59e-01 80.0% 100.0%
3723104 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.79 59.0 6.33e-01 76.7% 96.9%
3998709 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.79 63.0 6.05e-01 83.3% 84.1%
3477162 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.79 62.0 4.70e-01 81.3% 96.2%
3480469 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.79 64.0 5.46e-01 84.0% 62.2%
3416977 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.79 62.0 4.94e-01 81.3% 100.0%
3831282 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.78 63.0 5.32e-01 82.7% 90.9%
3773127 70.3.1.11 beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND 0.78 62.0 4.10e-01 81.3% 56.9%
3243864 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 63.0 4.93e-01 82.7% 98.6%
3566461 70.3.1.11 beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND 0.78 62.0 4.62e-01 82.0% 93.8%
3193960 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 62.0 5.07e-01 81.3% 78.8%
3398147 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 62.0 4.77e-01 82.0% 95.7%
3353301 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 61.0 4.80e-01 80.7% 95.4%
5056357 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 71.0 7.16e-01 97.3% 96.0%
3395720 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 61.0 4.83e-01 81.3% 100.0%
4880894 377.9.1.1 few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND 0.78 62.0 4.97e-01 82.0% 98.9%
3699656 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 70.0 7.15e-01 96.0% 98.6%
4026058 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 63.0 5.22e-01 84.0% 64.1%
3403081 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.78 62.0 4.95e-01 82.7% 96.7%
4013445 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.77 62.0 5.26e-01 82.7% 83.0%
3360524 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.77 62.0 5.38e-01 83.3% 59.1%
3403295 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.77 60.0 4.89e-01 80.7% 100.0%
3917273 70.3.1.11 beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND 0.77 62.0 4.59e-01 82.7% 98.9%
3264863 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.77 61.0 4.67e-01 81.3% 96.5%
3396018 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.77 61.0 4.83e-01 81.3% 100.0%
3399222 70.3.1.2 beta barrels › beta-clip › SET domain-like › SET domain-like › zf-MYND 0.77 61.0 4.67e-01 82.0% 96.2%
4646376 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.76 62.0 5.75e-01 84.7% 89.8%
4023500 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.76 61.0 5.04e-01 82.7% 79.6%
3324724 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.75 61.0 6.42e-01 95.3% 92.6%
3739593 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.75 59.0 4.76e-01 81.3% 93.6%
3754133 70.3.1.5 beta barrels › beta-clip › SET domain-like › SET domain-like › PRDM2_PR 0.75 59.0 5.62e-01 97.3% 71.8%
3218768 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.74 62.0 5.56e-01 86.7% 75.0%
3248875 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.74 61.0 4.94e-01 86.0% 93.3%
4629018 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.74 59.0 4.55e-01 82.7% 91.9%
3783216 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.74 59.0 4.58e-01 82.0% 91.9%
2755847 70.3.1.5 beta barrels › beta-clip › SET domain-like › SET domain-like › PRDM2_PR 0.74 56.0 6.28e-01 84.7% 98.3%
3262764 70.3.1.11 beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND 0.74 59.0 5.18e-01 82.7% 96.7%
3370438 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.73 54.0 5.84e-01 76.0% 88.5%
3205142 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.73 56.0 5.25e-01 79.3% 100.0%
4015470 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.73 62.0 5.43e-01 89.3% 94.9%
3218380 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.72 68.0 6.45e-01 99.3% 89.1%
3902555 70.3.1.5 beta barrels › beta-clip › SET domain-like › SET domain-like › PRDM2_PR 0.72 61.0 6.03e-01 88.7% 83.7%
3921916 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.70 63.0 5.69e-01 95.3% 71.8%
1756172 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.70 60.0 5.54e-01 96.0% 71.9%
3241137 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.68 57.0 4.25e-01 88.7% 77.8%
4603710 70.3.1.11 beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND 0.67 56.0 4.22e-01 86.7% 93.4%
4150303 70.3.1.4 beta barrels › beta-clip › SET domain-like › SET domain-like › FOG1-like_PR 0.65 47.0 5.42e-01 95.3% 99.1%
3655593 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.65 62.0 5.35e-01 100.0% 80.0%
3305169 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.63 49.0 3.93e-01 80.0% 100.0%