←Back to structures
PH2015_18_scaffold_2_prodigal-single.1__X__X__00105
Bact-VirPH2015_18_scaffold_2_prodigal-single.1__X__X__00105
Identity
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-65
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rbsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 39.0 | 3.53e-01 | 100.0% | 48.9% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 44.0 | 3.56e-01 | 83.6% | 54.2% |
| 3pvlA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 40.0 | 3.56e-01 | 100.0% | 50.0% |
| 1g1cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 39.0 | 3.39e-01 | 100.0% | 48.0% |
| 6a2bA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.48e-01 | 100.0% | 55.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3443127 | 1.1.1.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C | 0.66 | 51.0 | 3.33e-01 | 82.0% | 74.9% |
| 3616199 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.65 | 53.0 | 3.50e-01 | 91.8% | 35.0% |
| 3300895 | 375.13.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › ubiquitin | 0.63 | 42.0 | 4.44e-01 | 88.5% | 76.4% |
| 5055164 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.60 | 53.0 | 4.47e-01 | 100.0% | 62.9% |
| 1563533 | 213.1.1.18 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › HAT_KAT11 | 0.60 | 43.0 | 2.64e-01 | 78.7% | 65.5% |
| 3715519 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 40.0 | 2.82e-01 | 72.1% | 22.0% |
| 4926979 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 50.0 | 4.02e-01 | 95.1% | 64.3% |
| 5028429 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.57 | 49.0 | 4.44e-01 | 98.4% | 100.0% |
| 3622513 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 45.0 | 4.60e-01 | 100.0% | 90.0% |
| 3788469 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.56 | 43.0 | 3.33e-01 | 85.2% | 37.3% |
| 4948154 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 46.0 | 3.69e-01 | 95.1% | 55.2% |
| 5073246 | 4019.1.1.0 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins | 0.53 | 42.0 | 3.18e-01 | 91.8% | 64.5% |
| 5065366 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.53 | 48.0 | 3.84e-01 | 100.0% | 60.0% |