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PH2015_18_scaffold_2_prodigal-single.1__X__X__00170
Bact-VirPH2015_18_scaffold_2_prodigal-single.1__X__X__00170
Identity
- Kingdom:
- phage
Quality
77.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-90
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6qpwA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 54.0 | 4.09e-01 | 90.5% | 91.5% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.55 | 43.0 | 3.48e-01 | 87.3% | 48.4% |
| 2g7cB01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.54 | 39.0 | 3.85e-01 | 77.8% | 93.9% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.52 | 37.0 | 3.24e-01 | 77.8% | 68.9% |
| 3hiaA00 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.52 | 38.0 | 3.83e-01 | 85.7% | 77.3% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 39.0 | 3.20e-01 | 82.5% | 99.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3274168 | 243.6.1.11 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PF31203 | 0.66 | 34.0 | 3.36e-01 | 71.4% | 44.6% |
| 4397193 | 304.60.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10, PF27436 | 0.60 | 45.0 | 3.38e-01 | 81.0% | 49.4% |
| 4301721 | 304.60.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10, PF27436 | 0.60 | 45.0 | 3.33e-01 | 81.0% | 48.2% |
| 4464751 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.57 | 48.0 | 3.64e-01 | 100.0% | 43.5% |
| 4413861 | 304.60.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10, PF27436 | 0.55 | 41.0 | 3.12e-01 | 81.0% | 51.0% |
| 4609818 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.55 | 41.0 | 3.13e-01 | 82.5% | 49.4% |