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PH2015_18_scaffold_2_prodigal-single.1__X__X__00314
Bact-VirPH2015_18_scaffold_2_prodigal-single.1__X__X__00314
Identity
- Kingdom:
- phage
Quality
95.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-80
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00096__D3-105
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gp0B02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.61 | 50.0 | 4.34e-01 | 91.0% | 82.9% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.55 | 43.0 | 4.37e-01 | 98.7% | 87.0% |
| 3it5G00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.55 | 36.0 | 2.78e-01 | 97.4% | 28.9% |
| 2bhoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 46.0 | 4.14e-01 | 94.9% | 94.5% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 39.0 | 4.11e-01 | 85.9% | 87.0% |
| 3vsmA03 | 2.60.40.4340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.42e-01 | 74.4% | 92.6% |
| 3uv0B00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.50 | 42.0 | 3.91e-01 | 93.6% | 77.8% |
| 2cfuA01 | 3.60.15.30 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Metallo-beta-lactamase domain | 0.50 | 42.0 | 2.81e-01 | 96.2% | 84.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3386275 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.68 | 33.0 | 3.67e-01 | 71.8% | 56.7% |
| 3246924 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 36.0 | 2.64e-01 | 85.9% | 24.3% |
| 4928523 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.55 | 35.0 | 3.89e-01 | 70.5% | 84.5% |
| 4928440 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.55 | 35.0 | 3.87e-01 | 71.8% | 83.3% |
| 3948814 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.55 | 39.0 | 3.60e-01 | 92.3% | 57.1% |
| 3931688 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.53 | 25.0 | 3.34e-01 | 87.2% | 94.3% |
| 5039311 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.53 | 37.0 | 3.01e-01 | 73.1% | 90.0% |
| 3984933 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.51 | 40.0 | 3.91e-01 | 96.2% | 76.7% |
| 3712602 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.51 | 44.0 | 3.70e-01 | 97.4% | 72.6% |
| 3573553 | 535.1.1.1 ↗ | alpha arrays › BEACH domain › BEACH domain › BEACH domain › Beach | 0.51 | 41.0 | 2.58e-01 | 89.7% | 32.2% |
| 3812925 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 30.0 | 3.37e-01 | 93.6% | 77.6% |
| 3929050 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.50 | 43.0 | 3.84e-01 | 97.4% | 81.7% |
| 3474675 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.50 | 36.0 | 2.44e-01 | 78.2% | 89.1% |