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PH2015_18_scaffold_2_prodigal-single.1__X__X__00415
Bact-VirPH2015_18_scaffold_2_prodigal-single.1__X__X__00415
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-77_127-246
Domain cluster:
rep: SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00142__D170-386
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rshA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.77 | 65.0 | 6.92e-01 | 94.9% | 98.3% |
| 6hfzA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.74 | 66.0 | 6.42e-01 | 99.0% | 86.0% |
| 5lnmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 50.0 | 5.62e-01 | 95.9% | 90.0% |
| 4s1pA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.73 | 64.0 | 6.58e-01 | 95.4% | 97.8% |
| 2w9xA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.72 | 68.0 | 6.43e-01 | 99.0% | 96.4% |
| 4j07A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.71 | 49.0 | 5.49e-01 | 99.0% | 89.5% |
| 1bwpA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 61.0 | 5.91e-01 | 97.4% | 83.0% |
| 2b99C00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.70 | 48.0 | 5.44e-01 | 99.5% | 89.5% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.70 | 66.0 | 6.55e-01 | 99.5% | 98.0% |
| 3kp1A04 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.70 | 47.0 | 5.33e-01 | 99.0% | 88.7% |
| 8gr2A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.70 | 62.0 | 6.30e-01 | 93.9% | 99.5% |
| 7tjbA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.68 | 63.0 | 6.19e-01 | 96.9% | 96.1% |
| 1c2yA00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.68 | 48.0 | 5.33e-01 | 100.0% | 90.3% |
| 1di0A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.67 | 48.0 | 5.41e-01 | 99.5% | 95.9% |
| 1qv9A01 | 3.40.50.10830 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) | 0.67 | 48.0 | 5.35e-01 | 99.0% | 93.5% |
| 1xrsB02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.66 | 47.0 | 5.11e-01 | 97.4% | 87.5% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.65 | 43.0 | 5.09e-01 | 96.9% | 98.5% |
| 6qp2A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 46.0 | 4.35e-01 | 99.5% | 62.0% |
| 3ucxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 55.0 | 5.06e-01 | 98.5% | 92.2% |
| 5jioA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 38.0 | 3.76e-01 | 85.7% | 57.9% |
| 5awhA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 44.0 | 4.58e-01 | 99.0% | 80.4% |
| 3gdwB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.60 | 36.0 | 4.23e-01 | 98.5% | 84.1% |
| 5ilgB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 54.0 | 4.91e-01 | 96.9% | 88.0% |
| 5bjuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 55.0 | 4.71e-01 | 98.5% | 70.2% |
| 1ujnA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 40.0 | 4.37e-01 | 86.2% | 81.4% |
| 4k9qA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.59 | 44.0 | 4.47e-01 | 98.5% | 77.2% |
| 3uhjC01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 38.0 | 4.20e-01 | 79.6% | 80.3% |
| 2gruA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 40.0 | 4.31e-01 | 80.6% | 79.4% |
| 1ga6A00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.59 | 54.0 | 4.37e-01 | 100.0% | 92.4% |
| 3vu9B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 43.0 | 4.37e-01 | 74.5% | 83.2% |
| 7jpjB01 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.58 | 44.0 | 4.07e-01 | 77.0% | 89.4% |
| 3cb2B01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.58 | 53.0 | 4.81e-01 | 100.0% | 97.4% |
| 1ur1A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 45.0 | 3.77e-01 | 82.1% | 79.8% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 37.0 | 4.38e-01 | 99.0% | 96.2% |
| 3qkwB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 47.0 | 4.95e-01 | 97.4% | 97.7% |
| 3czpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 47.0 | 4.62e-01 | 99.5% | 81.2% |
| 4c6rA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.57 | 44.0 | 4.73e-01 | 96.9% | 97.5% |
| 1sbzD00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.57 | 47.0 | 4.87e-01 | 95.4% | 93.5% |
| 5z3kB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 47.0 | 4.01e-01 | 89.8% | 95.5% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 50.0 | 4.21e-01 | 96.9% | 70.2% |
| 1pvdA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.56 | 46.0 | 4.56e-01 | 85.7% | 85.8% |
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 50.0 | 4.35e-01 | 96.9% | 90.7% |
| 1uumA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 3.88e-01 | 89.8% | 93.4% |
| 3fokA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 49.0 | 4.28e-01 | 95.4% | 88.5% |
| 6sj3B01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 48.0 | 4.08e-01 | 94.9% | 98.8% |
| 3ayvD00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 47.0 | 4.44e-01 | 94.9% | 88.9% |
| 1rrmA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 41.0 | 4.24e-01 | 86.2% | 83.2% |
| 7wwfA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 48.0 | 4.27e-01 | 94.9% | 99.6% |
| 1y8aA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 40.0 | 4.34e-01 | 99.0% | 90.4% |
| 2e4uA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 41.0 | 4.30e-01 | 100.0% | 88.4% |
| 3qc0A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 46.0 | 4.19e-01 | 92.9% | 85.7% |
| 3u7eB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 33.0 | 3.31e-01 | 81.6% | 58.7% |
| 3hnoA01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 42.0 | 4.04e-01 | 96.4% | 71.9% |
| 4htyA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 47.0 | 3.97e-01 | 95.4% | 94.2% |
| 2gwgA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 45.0 | 3.89e-01 | 93.4% | 94.5% |
| 6jowA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 49.0 | 3.83e-01 | 100.0% | 82.5% |
| 3mduA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 46.0 | 3.89e-01 | 95.4% | 93.0% |
| 1cecA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 45.0 | 3.81e-01 | 91.8% | 88.2% |
| 4l9aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 48.0 | 4.32e-01 | 100.0% | 91.2% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 47.0 | 4.67e-01 | 98.0% | 96.6% |
| 6ketA01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.52 | 45.0 | 3.78e-01 | 93.9% | 91.9% |
| 4zxoA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 47.0 | 3.95e-01 | 100.0% | 98.5% |
| 4ga4A02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.52 | 47.0 | 4.32e-01 | 99.0% | 80.1% |
| 8hi7B01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 45.0 | 4.03e-01 | 95.4% | 85.5% |
| 3qyqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 45.0 | 4.06e-01 | 94.4% | 83.5% |
| 2c40A00 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.52 | 46.0 | 4.04e-01 | 98.0% | 91.7% |
| 1xo1A02 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.52 | 34.0 | 3.79e-01 | 98.5% | 81.8% |
| 1nmnA00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.52 | 32.0 | 3.85e-01 | 95.4% | 97.5% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 45.0 | 4.02e-01 | 95.4% | 99.6% |
| 1cr2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 42.0 | 3.94e-01 | 93.9% | 71.1% |
| 1ii7A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.50 | 44.0 | 4.05e-01 | 93.4% | 80.7% |
| 3rptA00 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.50 | 44.0 | 4.06e-01 | 95.4% | 85.4% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4624410 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.77 | 67.0 | 6.76e-01 | 96.9% | 91.3% |
| 3288559 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.75 | 70.0 | 6.62e-01 | 98.0% | 85.7% |
| 5038291 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.75 | 49.0 | 5.90e-01 | 98.5% | 97.7% |
| 2429326 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.74 | 59.0 | 5.94e-01 | 83.7% | 81.5% |
| 2526997 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.74 | 66.0 | 6.24e-01 | 99.0% | 80.0% |
| 1492251 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.73 | 64.0 | 6.58e-01 | 95.4% | 97.8% |
| 5037295 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.72 | 67.0 | 6.72e-01 | 98.0% | 98.5% |
| 5058170 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.72 | 67.0 | 5.92e-01 | 99.0% | 84.0% |
| 4433821 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.71 | 50.0 | 5.50e-01 | 99.0% | 86.9% |
| 152052 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.71 | 52.0 | 5.71e-01 | 98.5% | 91.8% |
| 4166467 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.71 | 49.0 | 5.65e-01 | 99.0% | 96.4% |
| 4079306 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.71 | 47.0 | 5.49e-01 | 99.0% | 92.9% |
| 4577399 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.71 | 49.0 | 5.36e-01 | 99.5% | 83.6% |
| 1337993 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.70 | 47.0 | 5.34e-01 | 99.0% | 88.7% |
| 3879317 | 2003.1.1.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ISPD_C | 0.70 | 52.0 | 5.67e-01 | 98.5% | 93.1% |
| 4975785 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.68 | 47.0 | 5.25e-01 | 99.5% | 87.7% |
| 5038863 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.68 | 48.0 | 5.19e-01 | 100.0% | 84.8% |
| 3401452 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.68 | 46.0 | 5.30e-01 | 98.0% | 95.0% |
| 3271634 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.65 | 49.0 | 4.72e-01 | 100.0% | 69.5% |
| 3836787 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.65 | 45.0 | 5.18e-01 | 94.9% | 96.6% |
| 4971974 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 44.0 | 4.84e-01 | 98.0% | 84.4% |
| 3976110 | 2004.1.1.641 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF6079 | 0.64 | 48.0 | 4.16e-01 | 77.0% | 99.0% |
| 3260634 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.63 | 55.0 | 5.43e-01 | 96.4% | 87.1% |
| 3263185 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.63 | 47.0 | 5.04e-01 | 99.0% | 90.6% |
| 5044220 | 2007.1.2.50 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peptidase_S8 | 0.62 | 45.0 | 4.89e-01 | 79.1% | 88.7% |
| 3801703 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 46.0 | 4.53e-01 | 99.5% | 69.3% |
| 3687231 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.61 | 56.0 | 4.74e-01 | 99.0% | 75.6% |
| None | — | 0.60 | 40.0 | 4.37e-01 | 79.6% | 80.6% | |
| 3403382 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.60 | 52.0 | 4.87e-01 | 92.3% | 94.0% |
| 4418688 | 2002.1.1.177 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEPcase_2 | 0.59 | 49.0 | 3.63e-01 | 87.8% | 53.9% |
| 3633478 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.59 | 54.0 | 4.74e-01 | 100.0% | 94.6% |
| 3615530 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.58 | 54.0 | 4.53e-01 | 99.0% | 99.1% |
| 3601530 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.58 | 51.0 | 4.56e-01 | 94.9% | 92.4% |
| 3200621 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.57 | 49.0 | 4.04e-01 | 92.3% | 95.6% |
| 5063550 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 42.0 | 3.46e-01 | 75.5% | 93.4% |
| 3593502 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.57 | 52.0 | 4.68e-01 | 97.4% | 93.2% |
| 3269258 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.57 | 51.0 | 4.83e-01 | 97.4% | 99.2% |
| 4945457 | 2007.2.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins | 0.57 | 49.0 | 5.09e-01 | 99.0% | 98.4% |
| 5011726 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.57 | 37.0 | 3.33e-01 | 70.4% | 44.6% |
| 3699187 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.57 | 51.0 | 4.60e-01 | 97.4% | 98.1% |
| 4996947 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.56 | 49.0 | 4.05e-01 | 93.9% | 93.9% |
| 3222454 | 2002.1.1.150 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase | 0.56 | 47.0 | 3.56e-01 | 90.3% | 55.6% |
| 3877997 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.56 | 50.0 | 4.54e-01 | 99.0% | 87.4% |
| 3602945 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.55 | 38.0 | 3.40e-01 | 72.4% | 48.2% |
| 3638114 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.55 | 46.0 | 3.66e-01 | 90.8% | 79.2% |
| 5064933 | 2004.1.1.141 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N | 0.53 | 48.0 | 4.70e-01 | 97.4% | 95.7% |
| 3895610 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 48.0 | 4.68e-01 | 99.0% | 92.7% |
| 8945 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.53 | 46.0 | 3.90e-01 | 93.9% | 95.1% |
| 4369666 | 2004.1.1.43 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRP54 | 0.53 | 45.0 | 4.46e-01 | 91.8% | 90.5% |
| 4219855 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.53 | 36.0 | 3.36e-01 | 70.9% | 53.6% |
| 4983562 | 2002.1.1.113 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › CdhD | 0.52 | 46.0 | 3.92e-01 | 95.4% | 74.5% |
| 3717261 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 43.0 | 4.09e-01 | 88.8% | 91.7% |
| 4118739 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.52 | 37.0 | 4.11e-01 | 97.4% | 95.9% |
| 4156472 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.52 | 36.0 | 4.01e-01 | 95.4% | 90.0% |
| 3601866 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 43.0 | 4.09e-01 | 88.8% | 94.5% |
| 4969197 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.51 | 42.0 | 4.48e-01 | 90.3% | 98.3% |
| 3644379 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 41.0 | 4.27e-01 | 84.2% | 92.8% |
| 5036046 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.51 | 46.0 | 3.80e-01 | 98.0% | 74.4% |
| 4632327 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.51 | 35.0 | 3.96e-01 | 95.4% | 93.8% |
| 4126066 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.51 | 36.0 | 4.07e-01 | 99.5% | 99.3% |
| 3797442 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.50 | 44.0 | 4.35e-01 | 93.9% | 96.2% |
| 4519677 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.50 | 43.0 | 3.99e-01 | 91.8% | 72.8% |
| 3388917 | 2002.1.1.114 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_85 | 0.50 | 44.0 | 3.68e-01 | 95.9% | 91.3% |
D2
medium
residues 80-125
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3weeA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 51.0 | 3.57e-01 | 100.0% | 83.6% |
| 4nreA02 | 1.20.245.10 | Mainly Alpha › Up-down Bundle › Lipoxygenase-1; domain 5 › Lipoxygenase-1; Domain 5 | 0.62 | 48.0 | 2.80e-01 | 87.0% | 58.0% |
| 1d5aA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.60 | 51.0 | 3.39e-01 | 100.0% | 88.0% |
| 4kzpB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 3.06e-01 | 100.0% | 33.2% |
| 1tzlA02 | 3.30.1920.50 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › | 0.56 | 47.0 | 4.36e-01 | 97.8% | 83.9% |
| 1qhdA02 | 1.10.1350.10 | Mainly Alpha › Orthogonal Bundle › Viral capsid alpha domain › Viral capsid alpha domain | 0.55 | 47.0 | 3.01e-01 | 97.8% | 76.2% |
| 2v89A01 | 3.30.160.290 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rag2 PHD finger | 0.55 | 32.0 | 3.54e-01 | 100.0% | 69.7% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 45.0 | 3.63e-01 | 100.0% | 52.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3436325 | 331.15.1.0 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 | 0.70 | 60.0 | 4.68e-01 | 100.0% | 83.8% |
| 3529047 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.65 | 55.0 | 3.53e-01 | 95.7% | 97.4% |
| 3962804 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.61 | 35.0 | 2.49e-01 | 95.7% | 17.9% |
| 3295705 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 47.0 | 3.37e-01 | 89.1% | 47.4% |
| 3496452 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 41.0 | 2.75e-01 | 73.9% | 100.0% |
| 3409806 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.56 | 45.0 | 3.03e-01 | 95.7% | 24.3% |
| 3603146 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.55 | 42.0 | 2.61e-01 | 84.8% | 33.7% |
| 3220597 | 7515.1.1.5 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C | 0.55 | 47.0 | 2.63e-01 | 95.7% | 40.7% |
| 5049176 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.55 | 41.0 | 3.46e-01 | 100.0% | 44.0% |
| 3321409 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.54 | 45.0 | 3.04e-01 | 95.7% | 26.1% |
| 3313968 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.51 | 43.0 | 2.97e-01 | 97.8% | 56.1% |
| 3457828 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.51 | 42.0 | 2.86e-01 | 100.0% | 69.5% |