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PH2015_18_scaffold_2_prodigal-single.1__X__X__00501
Bact-VirPH2015_18_scaffold_2_prodigal-single.1__X__X__00501
Identity
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-116
Domain cluster:
rep: PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00420__D5-112
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4alzA01 | 3.30.1340.30 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › | 0.69 | 39.0 | 4.86e-01 | 83.9% | 98.4% |
| 5fusA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.69 | 42.0 | 3.33e-01 | 86.6% | 31.2% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.63 | 47.0 | 5.19e-01 | 97.3% | 100.0% |
| 1xmtA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 39.0 | 4.22e-01 | 79.5% | 72.6% |
| 3prbA03 | 3.30.70.2210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 40.0 | 4.70e-01 | 87.5% | 98.6% |
| 3fg6A01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.61 | 47.0 | 5.02e-01 | 97.3% | 93.9% |
| 7c2gG01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.61 | 44.0 | 4.88e-01 | 92.0% | 96.6% |
| 3bypA00 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.60 | 40.0 | 4.55e-01 | 89.3% | 93.9% |
| 1d0nA02 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.59 | 46.0 | 4.69e-01 | 95.5% | 84.5% |
| 8dqaA01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.59 | 43.0 | 4.57e-01 | 83.9% | 85.7% |
| 1tisA00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.59 | 44.0 | 3.37e-01 | 81.2% | 54.5% |
| 3w5xA00 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.58 | 39.0 | 4.43e-01 | 88.4% | 95.0% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 40.0 | 3.74e-01 | 73.2% | 71.0% |
| 2zztA00 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.56 | 38.0 | 4.30e-01 | 89.3% | 96.3% |
| 7whfC01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.56 | 45.0 | 4.71e-01 | 91.1% | 97.0% |
| 2rrlA01 | 3.30.750.140 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.56 | 40.0 | 4.05e-01 | 78.6% | 73.9% |
| 1mkyA03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 38.0 | 4.16e-01 | 89.3% | 87.8% |
| 5ynrA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.56 | 47.0 | 4.45e-01 | 92.9% | 84.1% |
| 2l72A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 47.0 | 4.64e-01 | 94.6% | 92.4% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 47.0 | 4.30e-01 | 92.9% | 83.8% |
| 3pbkA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.55 | 40.0 | 4.14e-01 | 98.2% | 82.4% |
| 7whfC02 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 45.0 | 4.71e-01 | 96.4% | 100.0% |
| 1ufhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 40.0 | 3.66e-01 | 78.6% | 82.6% |
| 6znpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 3.45e-01 | 83.0% | 58.0% |
| 4lizA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 43.0 | 4.06e-01 | 86.6% | 82.6% |
| 2xfaA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 46.0 | 4.32e-01 | 95.5% | 88.1% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 46.0 | 4.20e-01 | 94.6% | 87.5% |
| 3dddA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 39.0 | 3.77e-01 | 77.7% | 88.5% |
| 4lhpF00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.53 | 43.0 | 4.18e-01 | 92.0% | 77.7% |
| 1hqz800 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 43.0 | 4.16e-01 | 92.0% | 86.4% |
| 1jdwA00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.52 | 47.0 | 3.31e-01 | 100.0% | 98.6% |
| 4dcuA03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 36.0 | 4.04e-01 | 88.4% | 97.6% |
| 1hjrA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 3.97e-01 | 94.6% | 81.0% |
| 2d4oA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 42.0 | 4.03e-01 | 89.3% | 98.4% |
| 2fe7B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 43.0 | 3.77e-01 | 92.0% | 92.2% |
| 6rk7B02 | 3.30.300.10 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.50 | 36.0 | 3.52e-01 | 89.3% | 65.6% |
| 2j5vB01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.50 | 38.0 | 3.03e-01 | 79.5% | 65.4% |
| 3i9sA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 42.0 | 3.72e-01 | 90.2% | 96.3% |
| 3nyqA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.50 | 35.0 | 3.95e-01 | 91.1% | 95.3% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4365538 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.68 | 45.0 | 3.71e-01 | 87.5% | 37.1% |
| 5002928 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.67 | 36.0 | 4.65e-01 | 76.8% | 96.7% |
| 4236698 | 219.1.1.20 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_14 | 0.66 | 52.0 | 3.97e-01 | 84.8% | 51.9% |
| 4267913 | 219.1.1.20 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_14 | 0.65 | 52.0 | 3.82e-01 | 85.7% | 47.2% |
| 5002606 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.64 | 43.0 | 4.77e-01 | 84.8% | 89.4% |
| 5071835 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.63 | 47.0 | 5.21e-01 | 92.0% | 97.8% |
| 410598 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.63 | 40.0 | 4.68e-01 | 86.6% | 96.0% |
| 4987665 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.63 | 41.0 | 4.85e-01 | 82.1% | 100.0% |
| 3963433 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.63 | 44.0 | 3.68e-01 | 72.3% | 88.7% |
| 4942670 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.63 | 41.0 | 4.81e-01 | 86.6% | 100.0% |
| 5027003 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.62 | 41.0 | 4.76e-01 | 86.6% | 100.0% |
| 5009704 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.62 | 46.0 | 4.67e-01 | 92.9% | 78.2% |
| 4982464 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.62 | 43.0 | 4.59e-01 | 85.7% | 84.0% |
| 4563228 | 327.6.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like | 0.62 | 43.0 | 4.84e-01 | 89.3% | 94.1% |
| 5050093 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.62 | 47.0 | 5.18e-01 | 94.6% | 100.0% |
| 4946801 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.61 | 46.0 | 4.99e-01 | 97.3% | 98.9% |
| 5062935 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.61 | 38.0 | 4.57e-01 | 84.8% | 100.0% |
| 4099942 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.61 | 40.0 | 4.64e-01 | 86.6% | 100.0% |
| 4294293 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.61 | 38.0 | 4.52e-01 | 88.4% | 94.7% |
| 3164605 | 327.6.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like | 0.60 | 42.0 | 4.72e-01 | 87.5% | 96.5% |
| 4168423 | 327.10.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DNA_pol3_a_NI | 0.60 | 38.0 | 4.30e-01 | 81.2% | 87.5% |
| 4593384 | 327.10.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DNA_pol3_a_NI | 0.60 | 40.0 | 4.49e-01 | 83.0% | 89.4% |
| 3526484 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.59 | 46.0 | 4.48e-01 | 96.4% | 74.4% |
| 3988245 | 327.10.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DNA_pol3_a_NI | 0.59 | 39.0 | 4.36e-01 | 83.0% | 89.4% |
| 3213531 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.58 | 41.0 | 4.54e-01 | 97.3% | 91.1% |
| 4979148 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.58 | 37.0 | 4.32e-01 | 87.5% | 91.3% |
| 4472636 | 327.18.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › DNA_pol3_a_NI | 0.58 | 38.0 | 4.29e-01 | 83.0% | 88.2% |
| 3545493 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.58 | 47.0 | 4.22e-01 | 96.4% | 62.6% |
| 5083492 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.58 | 40.0 | 4.54e-01 | 92.9% | 94.1% |
| 3588358 | 327.10.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DNA_pol3_a_NI | 0.58 | 38.0 | 4.28e-01 | 83.0% | 88.2% |
| 5076994 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.58 | 47.0 | 4.87e-01 | 99.1% | 93.3% |
| 3202021 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.58 | 44.0 | 4.64e-01 | 95.5% | 91.0% |
| 3944105 | 327.6.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like | 0.58 | 40.0 | 4.47e-01 | 87.5% | 100.0% |
| 4673874 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.57 | 46.0 | 4.27e-01 | 95.5% | 68.6% |
| 5034898 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.57 | 38.0 | 4.25e-01 | 90.2% | 88.2% |
| 3387384 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.57 | 43.0 | 4.68e-01 | 95.5% | 100.0% |
| 5064259 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.57 | 38.0 | 4.29e-01 | 92.0% | 100.0% |
| 5067906 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.57 | 42.0 | 4.52e-01 | 95.5% | 95.6% |
| 4273189 | 327.18.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › DNA_pol3_a_NI | 0.57 | 37.0 | 4.18e-01 | 83.9% | 88.2% |
| 4008850 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.57 | 41.0 | 4.20e-01 | 85.7% | 80.0% |
| 5000752 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.57 | 39.0 | 4.18e-01 | 93.8% | 83.2% |
| 3269368 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.57 | 46.0 | 4.54e-01 | 95.5% | 81.7% |
| 4032703 | 327.10.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DNA_pol3_a_NI | 0.57 | 37.0 | 4.16e-01 | 83.9% | 88.2% |
| 3634459 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.57 | 45.0 | 4.62e-01 | 95.5% | 89.1% |
| 3964844 | 327.6.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like | 0.57 | 39.0 | 4.25e-01 | 89.3% | 88.9% |
| 3623287 | 327.11.1.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › MRP-S24 | 0.56 | 40.0 | 3.79e-01 | 94.6% | 60.0% |
| 3972707 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.56 | 41.0 | 4.40e-01 | 78.6% | 89.5% |
| 3721572 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.56 | 43.0 | 3.90e-01 | 100.0% | 60.7% |
| 4666659 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.56 | 39.0 | 4.38e-01 | 86.6% | 100.0% |
| 4067600 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.56 | 50.0 | 4.31e-01 | 98.2% | 70.9% |
| 5031105 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.56 | 46.0 | 4.59e-01 | 96.4% | 87.0% |
| 3413173 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.56 | 44.0 | 4.23e-01 | 95.5% | 73.8% |
| 4137462 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.56 | 45.0 | 4.70e-01 | 88.4% | 99.0% |
| 3787053 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.55 | 46.0 | 4.34e-01 | 92.0% | 88.6% |
| 4973380 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.55 | 42.0 | 4.38e-01 | 96.4% | 88.6% |
| 146964 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.55 | 41.0 | 3.58e-01 | 77.7% | 56.2% |
| 3833645 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.55 | 49.0 | 3.62e-01 | 97.3% | 44.4% |
| 3731819 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.55 | 44.0 | 4.53e-01 | 98.2% | 92.4% |
| 3464998 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.55 | 49.0 | 4.61e-01 | 97.3% | 85.2% |
| 5030913 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.55 | 46.0 | 4.11e-01 | 97.3% | 65.2% |
| 5014624 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.55 | 46.0 | 4.81e-01 | 97.3% | 98.1% |
| 3374748 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.54 | 37.0 | 4.05e-01 | 92.0% | 87.8% |
| 4977550 | 213.5.1.1 ↗ | a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like | 0.54 | 39.0 | 4.06e-01 | 74.1% | 100.0% |
| 4012707 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.54 | 46.0 | 4.28e-01 | 95.5% | 88.6% |
| 4393604 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.54 | 46.0 | 4.26e-01 | 95.5% | 88.5% |
| 3956580 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.54 | 40.0 | 4.10e-01 | 97.3% | 81.8% |
| 3705025 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.54 | 46.0 | 4.32e-01 | 92.9% | 84.4% |
| 4953262 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.54 | 36.0 | 4.06e-01 | 90.2% | 95.0% |
| 4977272 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.53 | 45.0 | 4.61e-01 | 97.3% | 95.4% |
| 3268419 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.53 | 45.0 | 4.54e-01 | 95.5% | 93.9% |
| 3290074 | 213.5.1.1 ↗ | a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like | 0.53 | 39.0 | 4.06e-01 | 77.7% | 94.0% |
| 3838476 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.52 | 37.0 | 4.10e-01 | 76.8% | 97.6% |
| 4064847 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.52 | 41.0 | 4.18e-01 | 100.0% | 90.5% |
| 3909552 | 316.1.1.37 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › FKTN_N | 0.52 | 44.0 | 3.69e-01 | 96.4% | 78.9% |
| 3394327 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 40.0 | 2.81e-01 | 82.1% | 57.3% |
| 4980027 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.52 | 44.0 | 3.47e-01 | 91.1% | 87.3% |
| 11099 | 213.1.1.20 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1999 | 0.51 | 42.0 | 3.99e-01 | 88.4% | 97.7% |
| 4514064 | 327.9.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Probable GTPase Der, C-terminal domain › Probable GTPase Der, C-terminal domain › KH_dom-like | 0.50 | 35.0 | 3.90e-01 | 87.5% | 96.5% |
| 4078398 | 2003.1.5.174 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 | 0.50 | 44.0 | 3.07e-01 | 99.1% | 50.5% |
| 3960051 | 327.5.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_2 | 0.50 | 38.0 | 3.91e-01 | 98.2% | 85.5% |
D2
high
residues 324-464
D3
high
residues 555-665
Domain cluster:
rep: IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001256__D4-105
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.73 | 39.0 | 5.14e-01 | 100.0% | 96.7% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.69 | 44.0 | 5.15e-01 | 100.0% | 94.7% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.69 | 40.0 | 4.89e-01 | 98.2% | 91.5% |
| 4a18X01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 39.0 | 4.51e-01 | 96.4% | 78.5% |
| 2qsdA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 36.0 | 4.40e-01 | 74.8% | 83.6% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.67 | 45.0 | 5.25e-01 | 97.3% | 100.0% |
| 2hfqA00 | 3.10.510.10 | Alpha Beta › Roll › NE1680-like fold › NE1680-like | 0.65 | 43.0 | 4.83e-01 | 84.7% | 89.4% |
| 2cuwA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.56 | 40.0 | 4.50e-01 | 73.9% | 100.0% |
| 1h2cA00 | 2.70.20.20 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain | 0.56 | 41.0 | 3.96e-01 | 76.6% | 98.4% |
| 4emeC02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.55 | 39.0 | 3.70e-01 | 73.0% | 74.8% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.52 | 32.0 | 2.78e-01 | 73.9% | 38.4% |
| 1kf6B01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.50 | 36.0 | 3.74e-01 | 74.8% | 80.8% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508212 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.79 | 45.0 | 5.54e-01 | 98.2% | 88.6% |
| 3517068 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.74 | 43.0 | 5.48e-01 | 80.2% | 100.0% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.72 | 40.0 | 5.11e-01 | 98.2% | 98.3% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.72 | 39.0 | 5.05e-01 | 98.2% | 98.3% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.71 | 39.0 | 4.90e-01 | 99.1% | 93.7% |
| 2512518 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.70 | 45.0 | 4.75e-01 | 100.0% | 71.3% |
| 2831852 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.70 | 45.0 | 4.74e-01 | 100.0% | 71.3% |
| 2106285 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.70 | 45.0 | 4.61e-01 | 100.0% | 66.7% |
| 5000510 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.70 | 44.0 | 5.24e-01 | 100.0% | 94.7% |
| 5030993 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.69 | 44.0 | 5.11e-01 | 100.0% | 90.0% |
| 5074648 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.69 | 44.0 | 5.14e-01 | 100.0% | 94.7% |
| 4084879 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.69 | 47.0 | 5.21e-01 | 92.8% | 90.6% |
| 4943401 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.68 | 45.0 | 5.08e-01 | 100.0% | 88.2% |
| 4996552 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 44.0 | 4.86e-01 | 100.0% | 84.7% |
| 5065436 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.68 | 38.0 | 4.70e-01 | 97.3% | 93.8% |
| 2527501 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 45.0 | 4.66e-01 | 100.0% | 72.1% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.67 | 43.0 | 5.06e-01 | 100.0% | 96.0% |
| 3345090 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.67 | 45.0 | 4.55e-01 | 100.0% | 69.4% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.67 | 45.0 | 4.65e-01 | 100.0% | 72.4% |
| 223776 | 3115.4.1.1 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 | 0.67 | 40.0 | 4.79e-01 | 100.0% | 93.0% |
| 3409700 | 4114.1.1.2 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › Ocnus | 0.66 | 37.0 | 3.73e-01 | 79.3% | 53.0% |
| 4990637 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 44.0 | 5.01e-01 | 100.0% | 91.6% |
| 4886584 | 3115.6.1.1 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY | 0.66 | 40.0 | 4.99e-01 | 86.5% | 98.6% |
| 3280008 | 3115.1.1.2 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4288 | 0.65 | 47.0 | 5.12e-01 | 97.3% | 91.1% |
| 4983090 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.65 | 43.0 | 4.96e-01 | 100.0% | 94.9% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 36.0 | 4.41e-01 | 98.2% | 92.3% |
| 5040494 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.60 | 43.0 | 3.93e-01 | 74.8% | 94.7% |
| 3979798 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 48.0 | 4.83e-01 | 93.7% | 91.8% |
| 3405253 | 74.1.1.0 ↗ | beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain | 0.56 | 35.0 | 4.08e-01 | 90.1% | 92.0% |
| 3905094 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.55 | 35.0 | 3.30e-01 | 72.1% | 51.9% |
| 3619496 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 39.0 | 2.71e-01 | 80.2% | 21.8% |
| 4974839 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 37.0 | 3.33e-01 | 70.3% | 99.3% |
| 3999001 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.52 | 31.0 | 3.21e-01 | 73.0% | 61.9% |
| 3686997 | 304.9.1.6 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 | 0.50 | 31.0 | 3.81e-01 | 79.3% | 100.0% |
D4
high
residues 680-755
D5
medium
residues 122-189
Domain cluster:
rep: MH494197.1__AXC39250.1__X__00538__D17-69
D6
medium
residues 190-277
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qf7A02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.81 | 55.0 | 6.41e-01 | 81.8% | 96.8% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.76 | 50.0 | 4.61e-01 | 77.3% | 52.7% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.75 | 54.0 | 4.91e-01 | 75.0% | 58.0% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 56.0 | 5.80e-01 | 77.3% | 84.0% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 52.0 | 5.45e-01 | 76.1% | 77.8% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.73 | 54.0 | 5.51e-01 | 77.3% | 84.9% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.73 | 51.0 | 5.39e-01 | 80.7% | 80.8% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 50.0 | 5.43e-01 | 76.1% | 87.3% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.72 | 51.0 | 5.15e-01 | 77.3% | 74.4% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.72 | 58.0 | 5.47e-01 | 85.2% | 98.1% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.72 | 52.0 | 5.46e-01 | 79.5% | 82.7% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.72 | 60.0 | 4.64e-01 | 89.8% | 84.0% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 48.0 | 5.50e-01 | 70.5% | 96.8% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 55.0 | 5.24e-01 | 79.5% | 99.0% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 46.0 | 5.38e-01 | 73.9% | 96.7% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.72 | 57.0 | 5.34e-01 | 85.2% | 97.2% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 54.0 | 5.34e-01 | 80.7% | 76.1% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 47.0 | 5.41e-01 | 78.4% | 100.0% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.71 | 47.0 | 4.78e-01 | 75.0% | 69.4% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.71 | 55.0 | 5.19e-01 | 83.0% | 92.5% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.70 | 53.0 | 5.62e-01 | 79.5% | 98.7% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 53.0 | 5.33e-01 | 83.0% | 80.5% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.70 | 47.0 | 5.16e-01 | 80.7% | 84.7% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.70 | 49.0 | 5.13e-01 | 80.7% | 81.0% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.70 | 45.0 | 5.15e-01 | 83.0% | 98.3% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.70 | 48.0 | 5.37e-01 | 75.0% | 95.5% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 46.0 | 4.61e-01 | 71.6% | 65.9% |
| 4abxA02 | 6.10.140.1090 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 51.0 | 5.17e-01 | 80.7% | 78.2% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.68 | 50.0 | 5.35e-01 | 77.3% | 88.2% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 43.0 | 4.92e-01 | 75.0% | 90.3% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 49.0 | 5.00e-01 | 77.3% | 76.1% |
| 1zbtA01 | 6.10.140.1950 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 53.0 | 5.51e-01 | 86.4% | 89.2% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.67 | 47.0 | 5.34e-01 | 80.7% | 100.0% |
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.67 | 45.0 | 5.25e-01 | 80.7% | 100.0% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 46.0 | 5.18e-01 | 76.1% | 97.0% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 47.0 | 5.14e-01 | 77.3% | 91.5% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.66 | 48.0 | 4.61e-01 | 77.3% | 66.3% |
| 1bhaA00 | 1.10.287.170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 46.0 | 5.12e-01 | 85.2% | 95.5% |
| 2gd5A00 | 6.10.140.1230 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 52.0 | 4.49e-01 | 87.5% | 75.4% |
| 6h9xA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.65 | 48.0 | 4.64e-01 | 79.5% | 89.2% |
| 6tqfA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.64 | 47.0 | 3.06e-01 | 77.3% | 17.6% |
| 2oezA02 | 1.10.3900.10 | Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like | 0.64 | 50.0 | 4.07e-01 | 83.0% | 63.2% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 52.0 | 4.81e-01 | 87.5% | 75.5% |
| 2wdqC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.62 | 44.0 | 4.04e-01 | 75.0% | 72.7% |
| 1owaA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 45.0 | 4.24e-01 | 76.1% | 66.0% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 51.0 | 3.97e-01 | 95.5% | 90.0% |
| 3t9oB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.55 | 46.0 | 4.14e-01 | 93.2% | 66.7% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3600361 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.77 | 57.0 | 5.53e-01 | 77.3% | 70.5% |
| 3192159 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.76 | 62.0 | 5.73e-01 | 86.4% | 89.1% |
| 3610706 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.76 | 50.0 | 5.23e-01 | 70.5% | 73.8% |
| 3716976 | 3285.1.1.0 ↗ | alpha duplicates or obligate multimers › Alix V domain › Alix V domain › Alix V domain | 0.76 | 56.0 | 3.81e-01 | 78.4% | 66.5% |
| 3545387 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.76 | 56.0 | 5.17e-01 | 77.3% | 62.7% |
| 3760768 | 148.1.3.248 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › KIF21A | 0.75 | 53.0 | 4.28e-01 | 77.3% | 40.0% |
| 4120406 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.75 | 61.0 | 5.59e-01 | 85.2% | 90.9% |
| 3646270 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.75 | 59.0 | 6.33e-01 | 81.8% | 100.0% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.75 | 54.0 | 5.69e-01 | 77.3% | 83.7% |
| 4283760 | 1203.1.2.7 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › GNVR | 0.74 | 52.0 | 4.37e-01 | 78.4% | 45.0% |
| 3761108 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.74 | 54.0 | 5.56e-01 | 77.3% | 78.8% |
| 3723174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.74 | 54.0 | 5.86e-01 | 79.5% | 90.7% |
| 2429105 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.74 | 49.0 | 5.31e-01 | 80.7% | 81.1% |
| 3623143 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.74 | 54.0 | 5.57e-01 | 77.3% | 84.7% |
| 4667859 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 59.0 | 5.32e-01 | 85.2% | 91.3% |
| 5070735 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 53.0 | 4.21e-01 | 77.3% | 38.3% |
| 3892515 | 632.22.1.173 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › DUF2678 | 0.72 | 53.0 | 5.16e-01 | 87.5% | 69.0% |
| 3276221 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.72 | 54.0 | 4.66e-01 | 77.3% | 56.2% |
| 4171766 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.72 | 58.0 | 5.78e-01 | 85.2% | 91.1% |
| 4987684 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.72 | 49.0 | 4.27e-01 | 77.3% | 46.9% |
| 3896686 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.71 | 58.0 | 5.56e-01 | 86.4% | 82.0% |
| 4516566 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.71 | 52.0 | 3.99e-01 | 77.3% | 35.3% |
| 5067572 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.71 | 50.0 | 4.70e-01 | 77.3% | 61.0% |
| 4304756 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.71 | 57.0 | 5.25e-01 | 85.2% | 92.7% |
| 3880538 | 632.1.1.28 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF2678 | 0.71 | 54.0 | 5.50e-01 | 87.5% | 83.5% |
| 5063047 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.71 | 50.0 | 4.78e-01 | 81.8% | 64.0% |
| 3741234 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.70 | 56.0 | 5.10e-01 | 85.2% | 93.0% |
| 4927769 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.70 | 53.0 | 5.26e-01 | 80.7% | 80.6% |
| 3229095 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.69 | 52.0 | 4.98e-01 | 78.4% | 96.0% |
| 3961597 | 7579.1.1.62 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_8 | 0.69 | 52.0 | 3.41e-01 | 79.5% | 23.7% |
| 3637046 | 192.8.1.327 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › PigL_N | 0.69 | 59.0 | 5.50e-01 | 93.2% | 85.5% |
| 3547209 | 192.15.1.204 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF2678 | 0.69 | 57.0 | 5.55e-01 | 92.0% | 81.0% |
| 3176852 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.69 | 55.0 | 4.88e-01 | 85.2% | 80.0% |
| 3518412 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.67 | 53.0 | 3.98e-01 | 86.4% | 74.7% |
| 5045400 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.67 | 49.0 | 3.21e-01 | 77.3% | 19.2% |
| 3788505 | 3755.3.1.126 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PEX11 | 0.66 | 55.0 | 4.68e-01 | 90.9% | 69.0% |
| 3626569 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.66 | 54.0 | 4.52e-01 | 90.9% | 76.1% |
| 3709390 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.65 | 45.0 | 4.20e-01 | 78.4% | 56.4% |
| 3839273 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.64 | 50.0 | 4.69e-01 | 85.2% | 93.6% |
| 4231284 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.63 | 49.0 | 4.63e-01 | 85.2% | 90.9% |
| 4470267 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.63 | 48.0 | 4.53e-01 | 83.0% | 91.8% |
| 3396399 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.63 | 46.0 | 4.21e-01 | 78.4% | 87.5% |
| 3742272 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 54.0 | 4.70e-01 | 96.6% | 91.1% |
| 4335871 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.62 | 48.0 | 4.48e-01 | 83.0% | 91.8% |
| 3520455 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.61 | 45.0 | 3.82e-01 | 81.8% | 46.9% |
| 4937169 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.61 | 48.0 | 4.45e-01 | 85.2% | 90.9% |
| 5025813 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.60 | 46.0 | 4.33e-01 | 83.0% | 90.0% |
| 3962324 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.59 | 51.0 | 3.87e-01 | 92.0% | 70.0% |
| 5044642 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.57 | 46.0 | 3.36e-01 | 89.8% | 32.5% |