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PH2015_20_scaffold_1_prodigal-single.1__X__X__00018
Bact-VirPH2015_20_scaffold_1_prodigal-single.1__X__X__00018
Identity
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 80-221
Domain cluster:
rep: BML_coassembly_scaffold_35_prodigal-single.1__X__X__00248__D218-335
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 28.0 | 3.94e-01 | 82.4% | 77.1% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.68 | 23.0 | 2.97e-01 | 82.4% | 48.9% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 28.0 | 4.05e-01 | 77.5% | 84.6% |
| 2yadA00 | 3.30.390.150 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.60 | 29.0 | 3.82e-01 | 95.8% | 83.1% |
| 3d5pA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.56 | 28.0 | 2.89e-01 | 90.1% | 49.6% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 32.0 | 3.84e-01 | 78.2% | 95.6% |
| 1pc6A00 | 1.10.3790.10 | Mainly Alpha › Orthogonal Bundle › NinB fold › NinB | 0.51 | 36.0 | 3.62e-01 | 76.1% | 71.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3262446 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.59 | 26.0 | 3.09e-01 | 84.5% | 58.1% |
| 1117317 | 3417.1.1.1 ↗ | a+b three layers › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › BRICHOS | 0.56 | 24.0 | 3.42e-01 | 81.0% | 85.7% |
| 4950477 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.56 | 24.0 | 3.21e-01 | 97.9% | 73.3% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.55 | 23.0 | 3.11e-01 | 97.9% | 72.9% |
| 5079949 | 829.1.1.3 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › DUF1367 | 0.55 | 36.0 | 4.20e-01 | 80.3% | 97.9% |
| 3649017 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.54 | 23.0 | 2.79e-01 | 88.7% | 58.9% |
| 4228206 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.53 | 25.0 | 3.33e-01 | 98.6% | 81.2% |