Back to structures

PH2015_20_scaffold_1_prodigal-single.1__X__X__00155

Bact-Vir

PH2015_20_scaffold_1_prodigal-single.1__X__X__00155

Identity

Kingdom:
phage

Quality

72.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-170
PDB
D2 high residues 324-485
PDB
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ju3A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.82 78.0 6.96e-01 100.0% 96.3%
1mpxA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.80 75.0 6.50e-01 100.0% 91.2%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.75 44.0 5.40e-01 100.0% 91.1%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.75 58.0 6.22e-01 100.0% 92.9%
3iiiA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.75 71.0 6.84e-01 100.0% 93.9%
5fuiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.74 55.0 6.21e-01 100.0% 99.2%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.74 46.0 5.36e-01 82.1% 86.3%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.71 52.0 5.78e-01 100.0% 95.3%
4p02B03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 54.0 5.78e-01 100.0% 91.6%
3j4uH00 2.60.120.1110 Mainly Beta › Sandwich › Jelly Rolls › 0.69 50.0 5.38e-01 100.0% 87.1%
3wnoA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 52.0 5.75e-01 100.0% 98.5%
1lnsA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 64.0 6.14e-01 100.0% 87.1%
5f7uA06 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 51.0 5.73e-01 100.0% 100.0%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 52.0 5.64e-01 100.0% 95.6%
5x7qA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 50.0 5.60e-01 100.0% 100.0%
7ehgC01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 51.0 5.65e-01 99.4% 100.0%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 53.0 5.22e-01 100.0% 79.4%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.66 45.0 5.22e-01 95.7% 100.0%
7uzsX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 45.0 5.22e-01 80.9% 96.5%
2qfeA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.66 45.0 4.88e-01 100.0% 82.0%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.65 45.0 4.79e-01 100.0% 79.9%
2jdaB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 50.0 5.27e-01 100.0% 90.8%
1l9nA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 44.0 5.12e-01 82.7% 97.4%
1oh4A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 60.0 5.86e-01 100.0% 93.1%
1kv3A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 44.0 5.09e-01 83.3% 97.4%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 5.29e-01 100.0% 95.6%
1uwwB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 58.0 5.68e-01 100.0% 91.6%
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 52.0 5.47e-01 100.0% 97.2%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 52.0 5.45e-01 100.0% 96.6%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 54.0 5.57e-01 100.0% 98.1%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 49.0 5.11e-01 100.0% 91.8%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 52.0 5.28e-01 100.0% 92.9%
1f0lA03 2.60.40.700 Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain 0.61 47.0 4.86e-01 94.4% 85.7%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 51.0 5.31e-01 100.0% 96.7%
2orzA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 51.0 5.27e-01 100.0% 94.8%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 56.0 5.55e-01 100.0% 97.6%
1gff200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 53.0 5.20e-01 100.0% 88.7%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.60 51.0 5.33e-01 100.0% 98.0%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 49.0 5.23e-01 100.0% 100.0%
2qjvA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 37.0 4.29e-01 96.9% 86.7%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 48.0 5.02e-01 100.0% 94.4%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 52.0 5.09e-01 100.0% 87.4%
5dmyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 4.83e-01 84.6% 96.7%
5z6pA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.59 55.0 5.34e-01 100.0% 94.4%
4cu7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 42.0 4.79e-01 96.9% 96.7%
1a8mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 4.93e-01 100.0% 91.4%
1tg7A05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 46.0 4.55e-01 94.4% 76.1%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 53.0 5.09e-01 100.0% 89.3%
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.59 46.0 4.97e-01 85.2% 97.8%
2je8A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 37.0 4.44e-01 84.0% 98.0%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 48.0 4.22e-01 89.5% 64.4%
4liqE05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 36.0 4.43e-01 82.1% 100.0%
1olrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.57 50.0 4.56e-01 96.9% 95.5%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 3.96e-01 88.9% 65.2%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 5.17e-01 100.0% 98.1%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 52.0 4.57e-01 100.0% 97.1%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.49e-01 100.0% 66.0%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.97e-01 100.0% 91.4%
3ammA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.56 50.0 4.30e-01 96.9% 99.2%
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 34.0 4.22e-01 83.3% 100.0%
1nlrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.56 50.0 4.53e-01 97.5% 94.6%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 4.40e-01 100.0% 69.6%
1gv9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 51.0 4.59e-01 100.0% 96.9%
4kq7A02 2.60.120.1390 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 0.55 48.0 4.41e-01 100.0% 71.6%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.86e-01 88.9% 71.4%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 50.0 4.55e-01 100.0% 98.6%
1uunA01 2.60.40.1650 Mainly Beta › Sandwich › Immunoglobulin-like › Porin MspA (Ig-like beta-sandwich domain) 0.55 41.0 4.46e-01 92.0% 95.5%
4ofqA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 44.0 4.48e-01 98.8% 91.6%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 49.0 4.34e-01 100.0% 71.7%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.68e-01 100.0% 91.3%
1j1tA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.28e-01 98.8% 97.8%
8ehtB01 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.53 43.0 4.55e-01 100.0% 97.3%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 4.43e-01 100.0% 80.0%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.07e-01 100.0% 82.0%
5xnrA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 4.13e-01 98.1% 98.3%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 48.0 4.09e-01 100.0% 70.4%
1uaiA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.18e-01 97.5% 97.3%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 4.07e-01 100.0% 75.7%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.50e-01 88.3% 95.3%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.36e-01 100.0% 98.5%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 3.97e-01 100.0% 63.1%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 3.85e-01 100.0% 62.2%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 47.0 4.43e-01 100.0% 91.7%
1y7bA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.28e-01 100.0% 98.6%
4ccdA03 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.51 46.0 4.33e-01 100.0% 97.5%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 46.0 4.24e-01 100.0% 91.7%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.66e-01 85.2% 76.4%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5031166 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.88 85.0 8.26e-01 100.0% 94.9%
5029875 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.86 83.0 7.83e-01 100.0% 97.3%
5029611 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.84 80.0 7.62e-01 100.0% 96.8%
3281330 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.83 80.0 6.62e-01 100.0% 93.1%
5033996 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.83 79.0 6.76e-01 100.0% 96.3%
5049237 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.83 79.0 6.99e-01 100.0% 93.2%
3280361 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.82 78.0 6.73e-01 100.0% 94.6%
1158 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.82 78.0 6.90e-01 100.0% 94.2%
5011055 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.82 78.0 7.45e-01 100.0% 96.2%
3285145 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.82 78.0 6.85e-01 100.0% 96.4%
3278369 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.82 78.0 6.74e-01 100.0% 95.3%
5033447 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.81 78.0 7.01e-01 100.0% 93.8%
5053199 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.80 76.0 6.83e-01 100.0% 95.3%
1297259 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.80 76.0 6.61e-01 100.0% 94.8%
4946469 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.80 76.0 6.95e-01 100.0% 95.1%
3953328 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.80 76.0 6.81e-01 100.0% 95.8%
3283022 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.80 76.0 6.48e-01 100.0% 92.2%
5039229 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.80 76.0 7.23e-01 100.0% 92.4%
1159 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.80 75.0 6.55e-01 100.0% 93.1%
1209147 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.79 75.0 6.80e-01 100.0% 94.2%
3691373 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.79 75.0 6.57e-01 100.0% 94.7%
3180611 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.78 74.0 6.58e-01 100.0% 96.4%
5083402 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.78 74.0 7.06e-01 100.0% 92.4%
3733433 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.78 74.0 6.62e-01 100.0% 96.7%
3057120 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.78 73.0 6.81e-01 100.0% 94.4%
3961882 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.78 74.0 6.96e-01 100.0% 95.8%
4944602 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 54.0 5.67e-01 100.0% 77.3%
5041422 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.77 74.0 6.95e-01 100.0% 91.1%
5083911 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 73.0 7.04e-01 100.0% 93.8%
5041444 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.77 73.0 7.14e-01 100.0% 92.6%
3279441 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.77 72.0 6.75e-01 100.0% 88.7%
3704589 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.77 73.0 6.79e-01 100.0% 93.8%
3962773 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.76 72.0 6.67e-01 100.0% 94.0%
4132938 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.76 72.0 6.75e-01 100.0% 93.7%
3597601 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.76 53.0 5.92e-01 100.0% 90.0%
5039956 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.76 72.0 6.75e-01 100.0% 92.6%
3593274 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.75 71.0 6.27e-01 100.0% 83.1%
4561987 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.75 71.0 6.25e-01 100.0% 95.1%
4307195 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.74 70.0 6.21e-01 100.0% 92.9%
4944599 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 53.0 5.78e-01 100.0% 90.4%
4491474 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.72 68.0 6.57e-01 100.0% 94.4%
3270665 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.72 50.0 5.68e-01 100.0% 92.0%
3821996 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.72 55.0 4.27e-01 100.0% 39.1%
3805836 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 52.0 5.64e-01 100.0% 88.9%
3593920 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 49.0 5.60e-01 100.0% 94.2%
3599776 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 48.0 5.50e-01 100.0% 94.1%
5034152 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.71 61.0 6.39e-01 92.6% 97.3%
3932049 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.70 54.0 5.27e-01 100.0% 73.7%
3827637 207.1.1.37 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.70 44.0 3.86e-01 100.0% 42.0%
1160 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.70 66.0 5.93e-01 100.0% 93.9%
4326586 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 47.0 5.42e-01 100.0% 95.0%
4136256 10.32.1.12 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 0.69 56.0 5.89e-01 100.0% 94.5%
4626412 10.32.1.238 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29980 0.67 49.0 5.21e-01 100.0% 85.7%
3172077 10.32.1.238 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29980 0.67 47.0 5.00e-01 100.0% 80.7%
4973922 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.67 39.0 4.94e-01 81.5% 97.9%
4049462 10.32.1.13 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_17_28 0.67 60.0 5.69e-01 96.9% 94.7%
5033393 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 57.0 5.89e-01 100.0% 98.0%
3382082 207.1.1.37 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.66 53.0 3.94e-01 100.0% 35.3%
1298682 10.32.1.168 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › HA70_C 0.65 45.0 4.90e-01 92.0% 84.3%
3901524 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.65 53.0 5.55e-01 100.0% 93.3%
4368632 10.32.1.266 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GldH_lipo 0.65 50.0 5.38e-01 100.0% 95.0%
5030450 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 54.0 5.70e-01 96.9% 98.6%
5031167 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 56.0 5.72e-01 100.0% 96.8%
1150 10.32.1.36 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM27 0.65 60.0 5.86e-01 100.0% 93.1%
3716837 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 43.0 4.73e-01 89.5% 83.8%
4930609 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 49.0 5.22e-01 93.2% 92.1%
3269628 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 58.0 5.74e-01 100.0% 95.3%
3650246 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 47.0 4.94e-01 93.2% 87.6%
3917421 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.62 49.0 5.11e-01 100.0% 90.0%
151167 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.62 51.0 5.27e-01 100.0% 92.3%
5039545 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 45.0 5.06e-01 75.9% 100.0%
3612145 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 46.0 4.78e-01 100.0% 84.7%
3435000 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.61 53.0 5.21e-01 100.0% 88.2%
3591997 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 41.0 4.56e-01 89.5% 86.2%
2523954 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.60 49.0 4.98e-01 100.0% 87.9%
5005245 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 53.0 4.71e-01 95.1% 89.1%
3949369 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 54.0 5.23e-01 100.0% 87.0%
3968310 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.59 50.0 5.23e-01 100.0% 100.0%
3345756 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 49.0 4.04e-01 100.0% 51.3%
5039888 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.59 40.0 4.41e-01 100.0% 88.8%
1193 10.2.1.27 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Phage_G 0.59 53.0 5.09e-01 100.0% 89.3%
3396410 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.58 53.0 5.24e-01 100.0% 96.0%
3562185 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.58 47.0 4.75e-01 100.0% 85.9%
4219528 10.2.1.55 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.58 39.0 4.54e-01 96.9% 95.7%
3860289 11.1.1.297 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.56 45.0 4.66e-01 100.0% 89.7%
3607773 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.54 49.0 4.39e-01 100.0% 83.4%
3878175 11.1.1.322 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ITGAX-like_Ig_3 0.54 46.0 4.38e-01 100.0% 76.8%
4294583 10.2.1.31 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin 0.52 37.0 4.13e-01 100.0% 97.5%
D3 high residues 605-752
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6o38A02 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.77 48.0 5.96e-01 97.3% 100.0%
6o38A03 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.76 43.0 5.66e-01 93.2% 100.0%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.61 38.0 4.25e-01 87.2% 78.6%
6gszA05 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.55 31.0 3.98e-01 89.2% 97.6%
4lorA03 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.55 35.0 3.86e-01 87.8% 79.8%
2zyzC00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.55 32.0 3.78e-01 75.0% 86.5%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2581338 520.2.1.1 beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.77 50.0 6.08e-01 100.0% 100.0%
4098875 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.57 52.0 4.29e-01 100.0% 74.7%
4320009 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.57 52.0 4.33e-01 100.0% 75.8%
4097357 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.57 51.0 4.32e-01 100.0% 77.6%
4143020 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.57 51.0 4.23e-01 100.0% 76.3%
4471739 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.57 51.0 4.26e-01 100.0% 77.3%
4144650 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.57 51.0 4.27e-01 100.0% 75.8%
4110501 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 51.0 4.25e-01 100.0% 77.7%
4682600 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.14e-01 100.0% 74.6%
4436233 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 51.0 4.16e-01 100.0% 76.7%
4408592 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.16e-01 100.0% 71.6%
4515393 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 51.0 4.34e-01 100.0% 77.5%
4394964 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.24e-01 100.0% 76.9%
4237289 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.22e-01 100.0% 76.2%
4282465 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.14e-01 100.0% 77.8%
4031089 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.18e-01 100.0% 75.5%
4634265 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.16e-01 100.0% 78.5%
4286724 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.10e-01 100.0% 73.8%
4219565 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.13e-01 100.0% 73.0%
4198624 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.10e-01 100.0% 75.0%
4237119 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.06e-01 100.0% 74.7%
4108875 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.56 50.0 4.33e-01 100.0% 75.3%
4092984 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.55 50.0 4.20e-01 100.0% 75.3%
4529236 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.55 50.0 4.12e-01 100.0% 73.7%
4244689 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.55 49.0 4.13e-01 100.0% 74.1%
3726449 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 26.0 3.19e-01 91.2% 70.0%
5009807 7592.1.1.5 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csx1_CARF 0.53 33.0 3.30e-01 89.2% 59.3%
3940343 2004.1.1.128 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PAXNEB 0.51 37.0 3.13e-01 74.3% 87.6%
3454981 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.50 23.0 2.91e-01 75.7% 71.2%
D4 medium residues 190-288
PDB
Domain cluster: representative