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PH2015_20_scaffold_1_prodigal-single.1__X__X__00297

Bact-Vir

PH2015_20_scaffold_1_prodigal-single.1__X__X__00297

Identity

Kingdom:
phage

Quality

85.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-63
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 4.61e-01 98.4% 51.2%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 48.0 5.16e-01 78.7% 90.4%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 4.77e-01 82.0% 78.9%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 59.0 5.06e-01 98.4% 63.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 4.76e-01 78.7% 72.7%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 48.0 4.71e-01 80.3% 88.2%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 45.0 4.45e-01 73.8% 87.7%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.64 47.0 4.74e-01 78.7% 85.0%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 47.0 4.09e-01 80.3% 61.2%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.80e-01 82.0% 78.5%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 47.0 4.68e-01 80.3% 98.4%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 48.0 4.47e-01 83.6% 78.5%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 4.87e-01 88.5% 81.2%
1ybiA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 47.0 3.65e-01 82.0% 100.0%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 46.0 4.38e-01 80.3% 90.7%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 3.91e-01 88.5% 85.0%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 44.0 3.74e-01 77.0% 66.7%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 55.0 4.97e-01 100.0% 73.5%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 3.82e-01 78.7% 48.0%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.61 44.0 4.49e-01 77.0% 78.0%
2dlpA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 46.0 4.18e-01 83.6% 74.1%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 42.0 4.31e-01 75.4% 98.3%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 43.0 4.27e-01 78.7% 78.8%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 43.0 4.42e-01 78.7% 100.0%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 42.0 3.60e-01 78.7% 71.6%
2coaA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 3.65e-01 83.6% 70.3%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.59 48.0 3.60e-01 95.1% 72.5%
3htrA00 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.58 43.0 3.77e-01 82.0% 62.2%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 44.0 3.77e-01 88.5% 97.4%
2djhA00 3.30.2310.30 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › Colicin E5 C-terminal ribonuclease domain (CRD) 0.58 41.0 3.59e-01 77.0% 62.5%
2kkxA00 3.30.40.80 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Effector protein NleG 0.57 50.0 4.27e-01 100.0% 59.8%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 42.0 3.75e-01 80.3% 67.4%
2cocA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 41.0 3.62e-01 80.3% 81.0%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 41.0 3.36e-01 78.7% 41.6%
2m9uA00 2.30.30.850 Mainly Beta › Roll › SH3 type barrels. › 0.56 49.0 4.36e-01 100.0% 92.1%
2vseA03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 41.0 3.28e-01 82.0% 95.7%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 40.0 2.62e-01 78.7% 19.8%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 44.0 3.34e-01 95.1% 81.1%
2xxlA03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 40.0 3.22e-01 82.0% 40.0%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 38.0 3.49e-01 80.3% 68.1%
1plsA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 38.0 3.24e-01 78.7% 87.6%
2iv2X01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.53 34.0 3.52e-01 96.7% 70.9%
6bg2A02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 3.34e-01 91.8% 85.6%
1ogyA01 3.30.200.210 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.51 43.0 3.52e-01 100.0% 90.3%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3996278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 4.36e-01 85.2% 40.8%
3581696 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 53.0 5.68e-01 78.7% 94.0%
3578824 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 56.0 4.89e-01 93.4% 57.8%
3622846 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 51.0 5.55e-01 78.7% 94.0%
4973749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 56.0 5.37e-01 90.2% 84.3%
3222051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 4.95e-01 80.3% 72.3%
3931418 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 49.0 5.01e-01 77.0% 98.3%
3475881 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 4.72e-01 77.0% 84.3%
4367301 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 5.11e-01 77.0% 96.4%
5001903 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.44e-01 95.1% 84.3%
4985969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 51.0 5.14e-01 83.6% 88.3%
3542246 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 50.0 4.68e-01 80.3% 82.7%
4640515 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.67 46.0 4.94e-01 82.0% 90.0%
4680376 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.67 49.0 5.12e-01 83.6% 89.1%
4953054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 55.0 5.23e-01 95.1% 78.7%
4252943 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.66 46.0 4.95e-01 73.8% 90.0%
3436022 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.66 48.0 5.01e-01 78.7% 87.3%
4534931 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.66 46.0 4.38e-01 75.4% 61.3%
4583465 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.66 46.0 4.93e-01 100.0% 90.0%
3675341 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.66 48.0 4.98e-01 78.7% 87.3%
4585317 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.65 46.0 4.81e-01 75.4% 83.6%
3599257 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.83e-01 82.0% 93.8%
4056584 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 47.0 4.38e-01 78.7% 75.0%
2756510 4.1.1.131 ↗ beta barrels › SH3 › SH3 › SH3 › MLVIN_C 0.64 47.0 4.22e-01 80.3% 59.6%
4432330 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.64 45.0 4.80e-01 73.8% 90.0%
4385345 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.64 45.0 4.78e-01 73.8% 90.0%
4029082 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 44.0 4.75e-01 73.8% 90.0%
2855766 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.64 47.0 3.66e-01 78.7% 45.1%
4053957 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.64 45.0 4.86e-01 80.3% 94.0%
4974669 4.1.1.458 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2098 0.63 51.0 4.58e-01 100.0% 62.2%
3604145 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 5.32e-01 100.0% 96.7%
4058919 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.63 44.0 4.70e-01 73.8% 90.0%
3715776 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 45.0 4.48e-01 95.1% 75.4%
3854638 4.1.1.131 ↗ beta barrels › SH3 › SH3 › SH3 › MLVIN_C 0.62 45.0 3.94e-01 80.3% 54.0%
3782293 4.1.1.170 ↗ beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.62 43.0 4.48e-01 98.4% 81.8%
3903323 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 46.0 4.30e-01 80.3% 78.7%
4974211 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.62 44.0 4.43e-01 77.0% 83.3%
3763060 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 44.0 4.25e-01 80.3% 98.6%
3920058 708.1.2.10 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 0.60 44.0 3.42e-01 80.3% 62.5%
3778124 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 42.0 4.19e-01 77.0% 83.1%
3390155 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.58 44.0 3.96e-01 82.0% 58.8%
3523046 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 43.0 3.98e-01 83.6% 71.8%
3821919 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.58 42.0 4.31e-01 80.3% 81.7%
3620094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 44.0 4.58e-01 88.5% 94.5%
3929881 220.1.1.61 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 0.57 41.0 3.48e-01 80.3% 67.8%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 42.0 4.27e-01 82.0% 86.7%
3305577 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.57 41.0 4.28e-01 82.0% 89.1%
3998645 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 39.0 3.86e-01 77.0% 86.2%
3623786 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.55 39.0 3.90e-01 78.7% 86.2%
4020558 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 47.0 4.64e-01 100.0% 98.5%
682 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.54 38.0 3.40e-01 77.0% 52.6%
5002125 375.1.3.3 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 0.52 44.0 4.47e-01 96.7% 98.3%
4284005 868.1.1.3 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.51 39.0 2.84e-01 85.2% 33.5%
3943177 1001.1.1.9 ↗ a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin, Molybdop_Fe4S4 0.51 34.0 2.77e-01 70.5% 82.2%
3494351 9.1.1.50 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7042 0.50 36.0 2.94e-01 80.3% 98.5%
2970356 1001.1.1.7 ↗ a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › NDSU1_4Fe-4S 0.50 33.0 3.29e-01 96.7% 63.1%
D2 high residues 71-127
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.73 54.0 5.08e-01 80.7% 81.7%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.72 57.0 4.01e-01 100.0% 28.2%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 49.0 5.25e-01 75.4% 83.7%
3kf6A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 52.0 3.91e-01 80.7% 36.8%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 52.0 5.10e-01 80.7% 78.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 52.0 5.30e-01 100.0% 88.9%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 46.0 3.58e-01 71.9% 68.2%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 45.0 3.58e-01 80.7% 33.3%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.66 49.0 4.68e-01 78.9% 67.2%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.66 46.0 3.50e-01 73.7% 87.3%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 56.0 5.38e-01 100.0% 90.9%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 4.87e-01 98.2% 82.1%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 57.0 4.20e-01 98.2% 57.4%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 48.0 4.85e-01 84.2% 79.3%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.65 45.0 2.96e-01 73.7% 58.8%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 54.0 3.93e-01 96.5% 49.4%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.64 55.0 3.95e-01 98.2% 43.9%
4epcA01 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.96e-01 100.0% 82.7%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 53.0 4.18e-01 94.7% 87.7%
1vqwA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 54.0 3.40e-01 98.2% 53.1%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 54.0 3.27e-01 98.2% 39.5%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 52.0 3.30e-01 91.2% 32.2%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.63 51.0 3.45e-01 94.7% 33.2%
4harA00 3.10.50.50 Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein 0.63 45.0 3.81e-01 77.2% 79.6%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 52.0 5.11e-01 100.0% 93.8%
3g1pA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.62 43.0 2.88e-01 73.7% 51.4%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 53.0 4.23e-01 98.2% 95.9%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.61 41.0 3.43e-01 70.2% 81.7%
4ak1A02 2.30.30.1270 Mainly Beta › Roll › SH3 type barrels. › 0.60 42.0 4.08e-01 73.7% 89.1%
2rk0A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.60 43.0 3.43e-01 82.5% 36.4%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.35e-01 86.0% 73.3%
2jvnA00 3.90.640.80 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.60 40.0 3.20e-01 100.0% 31.7%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 46.0 3.53e-01 84.2% 65.4%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.60 47.0 3.25e-01 89.5% 77.0%
2d9uA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 42.0 3.92e-01 75.4% 59.5%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 45.0 3.56e-01 82.5% 72.0%
1tzdA00 3.30.470.160 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase 0.58 44.0 2.99e-01 86.0% 82.3%
5g5tA02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 47.0 3.30e-01 94.7% 75.5%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.58 50.0 4.31e-01 100.0% 65.6%
2l2fA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.57 47.0 3.86e-01 93.0% 75.9%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 46.0 3.76e-01 89.5% 76.9%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 46.0 3.89e-01 89.5% 82.1%
2z0fA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.57 38.0 3.16e-01 86.0% 38.2%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.57 49.0 2.93e-01 100.0% 23.3%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.56 47.0 3.82e-01 93.0% 75.2%
1mtpA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 45.0 3.90e-01 89.5% 79.1%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 48.0 4.01e-01 100.0% 68.0%
1o97C00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 47.0 3.18e-01 100.0% 56.2%
3wmyA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 47.0 2.99e-01 96.5% 25.2%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 45.0 3.59e-01 91.2% 77.3%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.55 42.0 4.13e-01 93.0% 76.6%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 44.0 3.60e-01 93.0% 89.1%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 43.0 3.44e-01 87.7% 77.3%
4o8uA00 3.30.420.440 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF4152 0.54 45.0 3.12e-01 98.2% 94.3%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 43.0 3.42e-01 93.0% 70.7%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 43.0 3.52e-01 93.0% 80.3%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 41.0 3.47e-01 87.7% 82.2%
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.53 45.0 3.31e-01 96.5% 48.4%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.56e-01 86.0% 86.4%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.53 44.0 3.48e-01 94.7% 88.9%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.32e-01 91.2% 63.8%
1uirA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.52 38.0 3.97e-01 84.2% 90.4%
1vloA01 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.52 37.0 2.90e-01 80.7% 78.6%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 40.0 2.90e-01 93.0% 54.8%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.51 39.0 3.40e-01 89.5% 79.6%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3989574 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 59.0 5.17e-01 98.2% 56.5%
4041376 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.76 63.0 5.66e-01 100.0% 66.3%
4932493 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 59.0 5.65e-01 100.0% 78.5%
4606688 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.72 53.0 4.87e-01 78.9% 78.7%
4948723 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.72 49.0 5.29e-01 73.7% 85.4%
3704305 4.1.1.344 ↗ beta barrels › SH3 › SH3 › SH3 › PF31193 0.72 58.0 5.45e-01 100.0% 72.9%
3737927 220.1.1.294 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 0.71 62.0 4.96e-01 96.5% 78.2%
3736175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 55.0 4.94e-01 100.0% 58.8%
4633023 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.70 53.0 4.01e-01 82.5% 43.6%
3924377 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.54e-01 98.2% 89.1%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 53.0 5.44e-01 98.2% 87.3%
5044389 4.26.1.0 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.70 50.0 5.31e-01 75.4% 98.0%
3967545 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.69 52.0 3.81e-01 82.5% 37.5%
4446834 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.69 52.0 4.15e-01 80.7% 43.4%
5044392 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.69 49.0 5.04e-01 75.4% 89.1%
5044391 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.68 52.0 5.54e-01 82.5% 100.0%
3970949 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.68 51.0 4.04e-01 80.7% 40.9%
3988584 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.68 52.0 4.30e-01 82.5% 54.0%
5078248 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.68 50.0 4.72e-01 78.9% 64.3%
3970503 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.67 51.0 3.94e-01 82.5% 48.8%
5034351 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.39e-01 100.0% 89.1%
4373021 2.4.1.6 ↗ beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.66 50.0 4.21e-01 82.5% 50.5%
3504193 220.1.1.49 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.66 55.0 4.24e-01 94.7% 79.2%
4966948 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.65 56.0 3.52e-01 94.7% 34.5%
157526 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 54.0 5.28e-01 96.5% 92.1%
3240407 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.65 55.0 5.16e-01 98.2% 78.6%
3924375 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.65 55.0 5.11e-01 100.0% 74.7%
3210707 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 54.0 5.36e-01 98.2% 98.3%
3964664 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.65 48.0 4.57e-01 80.7% 75.0%
3941170 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.64 54.0 5.07e-01 96.5% 77.1%
3631298 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 55.0 5.08e-01 100.0% 80.0%
3942573 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.17e-01 100.0% 89.7%
4022461 2.1.1.52 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.64 48.0 3.28e-01 80.7% 34.1%
4944705 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.64 54.0 4.29e-01 96.5% 97.5%
4880118 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.63 50.0 4.74e-01 87.7% 72.9%
4218488 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 53.0 4.87e-01 100.0% 75.0%
3566631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 52.0 4.79e-01 100.0% 75.0%
3627859 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.62 53.0 4.95e-01 100.0% 76.0%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 5.05e-01 100.0% 92.3%
4927204 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 46.0 3.93e-01 78.9% 78.9%
3786775 109.54.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 0.62 52.0 3.01e-01 94.7% 19.3%
5040236 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.61 54.0 3.49e-01 100.0% 54.3%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 5.00e-01 98.2% 87.5%
4964835 223.2.1.63 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 0.61 47.0 3.77e-01 84.2% 84.3%
5071984 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 46.0 3.48e-01 82.5% 62.1%
3260517 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 43.0 3.43e-01 77.2% 98.3%
4028731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 4.94e-01 100.0% 87.7%
2501356 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.60 51.0 3.15e-01 96.5% 20.8%
3517193 391.1.1.7 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.59 41.0 3.42e-01 73.7% 72.0%
3210421 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.59 47.0 3.53e-01 91.2% 85.2%
5032809 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.58 46.0 3.70e-01 100.0% 40.8%
3518895 391.1.2.9 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 0.58 41.0 3.38e-01 73.7% 71.0%
4977260 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 44.0 3.17e-01 80.7% 28.2%
4085772 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.58 49.0 4.56e-01 96.5% 76.0%
4999777 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.58 50.0 3.30e-01 100.0% 55.8%
3253768 4.1.1.308 ↗ beta barrels › SH3 › SH3 › SH3 › PF31073 0.58 50.0 4.75e-01 100.0% 84.3%
4945229 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 44.0 3.47e-01 84.2% 74.2%
2553270 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.56 48.0 4.50e-01 100.0% 79.5%
4001239 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 44.0 3.89e-01 94.7% 81.1%
3966988 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.56 46.0 3.14e-01 100.0% 54.4%
3651091 5.1.4.15 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 0.55 47.0 2.80e-01 100.0% 65.8%
4000212 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 45.0 2.81e-01 93.0% 22.6%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.15e-01 100.0% 83.5%
3487453 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.55 46.0 3.70e-01 100.0% 84.8%
3435006 4.1.1.308 ↗ beta barrels › SH3 › SH3 › SH3 › PF31073 0.55 46.0 4.48e-01 98.2% 86.2%
3227025 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 45.0 4.45e-01 94.7% 90.0%
5032454 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.54 41.0 3.32e-01 100.0% 39.2%
4024730 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.53 42.0 3.80e-01 91.2% 82.4%
3445382 3699.1.1.1 ↗ beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.53 35.0 3.91e-01 70.2% 97.5%
3279508 283.1.1.4 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › ThrE 0.52 41.0 3.18e-01 89.5% 71.1%
5009785 321.1.1.0 ↗ a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase 0.51 37.0 2.69e-01 78.9% 83.4%