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PH2015_20_scaffold_1_prodigal-single.1__X__X__00341
Bact-VirPH2015_20_scaffold_1_prodigal-single.1__X__X__00341
Identity
- Kingdom:
- phage
Quality
81.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-113
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 41.0 | 3.72e-01 | 75.5% | 80.5% |
| 3vc1J00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 48.0 | 3.54e-01 | 95.1% | 88.0% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 29.0 | 3.63e-01 | 84.3% | 92.9% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.51 | 31.0 | 3.32e-01 | 73.5% | 69.8% |
| 4hwdD00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.50 | 35.0 | 3.78e-01 | 72.5% | 82.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2514499 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.62 | 54.0 | 3.97e-01 | 97.1% | 94.0% |
| 4928754 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.57 | 42.0 | 3.69e-01 | 76.5% | 80.0% |
| 3286716 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.57 | 48.0 | 3.51e-01 | 93.1% | 92.6% |
| 4024934 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.55 | 38.0 | 3.88e-01 | 70.6% | 75.0% |
| 3669935 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.54 | 39.0 | 3.33e-01 | 74.5% | 56.8% |
| 4079239 | 264.1.1.4 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › CPDase | 0.54 | 47.0 | 3.89e-01 | 100.0% | 79.8% |
| 4238416 | 603.1.1.125 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PLU-1 | 0.53 | 37.0 | 3.82e-01 | 71.6% | 82.0% |
| 3788314 | 264.1.1.4 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › CPDase | 0.53 | 46.0 | 3.82e-01 | 100.0% | 83.6% |
| 3544765 | 109.4.1.601 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PLU-1 | 0.53 | 37.0 | 3.77e-01 | 71.6% | 82.0% |
| 3253812 | 601.7.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Ribonuc_2-5A | 0.52 | 45.0 | 3.97e-01 | 100.0% | 64.7% |
| 3828970 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.51 | 36.0 | 3.72e-01 | 72.5% | 77.9% |
| 3288806 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 35.0 | 3.09e-01 | 71.6% | 62.7% |
| 3613815 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 35.0 | 2.73e-01 | 71.6% | 36.6% |