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PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00078
Bact-VirPH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00078
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-64
Domain cluster:
rep: BML_08042016_6_5m_scaffold_18_prodigal-single.1__X__X__00119__D7-59
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 42.0 | 4.23e-01 | 100.0% | 66.2% |
| 4kcaA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 52.0 | 3.18e-01 | 100.0% | 20.6% |
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.58 | 46.0 | 3.70e-01 | 92.1% | 59.1% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 50.0 | 4.39e-01 | 100.0% | 68.8% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 47.0 | 3.76e-01 | 100.0% | 86.4% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 45.0 | 3.22e-01 | 92.1% | 61.8% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.53 | 44.0 | 3.48e-01 | 100.0% | 58.4% |
| 4pc3C03 | 3.30.479.20 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain | 0.52 | 39.0 | 3.73e-01 | 82.5% | 98.6% |
| 1viuC00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 44.0 | 3.16e-01 | 93.7% | 66.1% |
| 1zuoB00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 42.0 | 3.31e-01 | 95.2% | 83.6% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.50 | 38.0 | 3.22e-01 | 82.5% | 50.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4890504 | 330.1.1.21 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5_C | 0.58 | 48.0 | 4.66e-01 | 95.2% | 83.1% |
| 3392707 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.56 | 47.0 | 3.56e-01 | 95.2% | 43.9% |
| 3332187 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.54 | 48.0 | 3.07e-01 | 100.0% | 23.2% |
| 3632708 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.54 | 47.0 | 2.87e-01 | 100.0% | 22.7% |
| 3253136 | 4292.1.1.0 ↗ | a+b two layers › FlaG-like › FlaG-related › FlaG-related | 0.53 | 44.0 | 3.74e-01 | 98.4% | 67.8% |
| 5043789 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.52 | 41.0 | 3.46e-01 | 85.7% | 88.0% |
| 3942981 | 2484.1.1.269 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_4 | 0.52 | 41.0 | 2.59e-01 | 90.5% | 17.6% |
| 5067631 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.51 | 42.0 | 3.50e-01 | 90.5% | 77.3% |
| 3743449 | 323.1.1.14 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AATase | 0.51 | 40.0 | 2.80e-01 | 95.2% | 56.2% |
| 3453844 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.51 | 41.0 | 2.70e-01 | 92.1% | 23.5% |
| 3880605 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 39.0 | 3.49e-01 | 84.1% | 76.7% |