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PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00105
Bact-VirPH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00105
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-22_49-120_222-310
Domain cluster:
rep: rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00335__D1-116_255-345
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wqmA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.57 | 38.0 | 4.38e-01 | 93.4% | 91.7% |
| 1a9xA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 35.0 | 4.28e-01 | 94.0% | 95.7% |
| 1lu4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 35.0 | 4.00e-01 | 94.0% | 83.6% |
| 4nesA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 44.0 | 4.69e-01 | 86.9% | 92.6% |
| 5enzA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 45.0 | 4.80e-01 | 86.9% | 95.0% |
| 1qrsA05 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 35.0 | 4.20e-01 | 91.8% | 95.9% |
| 1v4vA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 44.0 | 4.70e-01 | 86.9% | 96.8% |
| 3cnhA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 38.0 | 4.37e-01 | 85.2% | 97.7% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 33.0 | 3.74e-01 | 97.8% | 83.0% |
| 5vlcA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 39.0 | 4.18e-01 | 94.5% | 89.9% |
| 4b4uA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.52 | 25.0 | 3.59e-01 | 90.7% | 97.7% |
| 3pnxA00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.52 | 36.0 | 3.86e-01 | 70.5% | 99.4% |
| 1vliA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 3.70e-01 | 89.6% | 91.8% |
| 7fg9A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 42.0 | 4.42e-01 | 90.2% | 96.9% |
| 5i45A00 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 44.0 | 4.30e-01 | 90.2% | 93.3% |
| 2x6qA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 43.0 | 4.20e-01 | 88.5% | 84.8% |
| 2f9fA00 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 42.0 | 4.43e-01 | 89.6% | 95.8% |
| 7mi0A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 43.0 | 4.29e-01 | 88.0% | 88.2% |
| 1fdrA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.51 | 37.0 | 4.03e-01 | 92.3% | 88.8% |
| 3t5tA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 43.0 | 4.26e-01 | 88.0% | 93.6% |
| 3ayjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 3.18e-01 | 83.1% | 83.4% |
| 2xciA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 42.0 | 4.19e-01 | 87.4% | 86.1% |
| 6fnuA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.50 | 44.0 | 3.75e-01 | 94.0% | 94.6% |
| 1rzuA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 43.0 | 4.11e-01 | 90.7% | 92.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5070796 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 62.0 | 4.88e-01 | 88.0% | 95.1% |
| 5049709 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 60.0 | 4.69e-01 | 89.1% | 88.1% |
| 3785529 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.57 | 41.0 | 4.57e-01 | 92.3% | 91.3% |
| 5042480 | 7512.1.1.8 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 | 0.56 | 43.0 | 4.69e-01 | 85.2% | 93.5% |
| 3545610 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.56 | 39.0 | 4.46e-01 | 92.9% | 93.6% |
| 4931829 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 36.0 | 4.28e-01 | 79.2% | 100.0% |
| 4974507 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.53 | 44.0 | 4.58e-01 | 90.7% | 93.1% |
| 4972770 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.52 | 45.0 | 4.45e-01 | 91.3% | 89.7% |
| 4983500 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.52 | 43.0 | 3.86e-01 | 88.0% | 98.8% |
| 4974364 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.52 | 41.0 | 4.06e-01 | 85.2% | 78.4% |
| 4947456 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.52 | 44.0 | 4.45e-01 | 90.2% | 92.8% |
| 4942924 | 7512.1.1.16 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Capsule_synth | 0.51 | 43.0 | 4.50e-01 | 90.2% | 95.3% |
| 4393876 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.51 | 44.0 | 4.11e-01 | 91.8% | 86.5% |
| 3600257 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.51 | 38.0 | 3.97e-01 | 76.5% | 95.9% |
| 3715161 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 38.0 | 2.97e-01 | 78.1% | 70.4% |
| 4019688 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.51 | 44.0 | 4.12e-01 | 92.9% | 78.2% |
| 3309027 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 43.0 | 3.75e-01 | 90.7% | 71.3% |
| 3988627 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 43.0 | 4.21e-01 | 90.2% | 86.7% |
| 4939936 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 42.0 | 4.38e-01 | 89.6% | 95.4% |
| 5051599 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 42.0 | 4.30e-01 | 88.0% | 91.4% |
| 3386137 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 43.0 | 4.22e-01 | 91.3% | 89.0% |
| 4929231 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.50 | 44.0 | 3.79e-01 | 94.0% | 91.9% |
| 3353160 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.50 | 39.0 | 3.50e-01 | 81.4% | 83.1% |
| 5067198 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 42.0 | 4.36e-01 | 89.1% | 95.3% |
D2
medium
residues 23-48_121-221
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2chrA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.63 | 48.0 | 4.06e-01 | 78.7% | 91.6% |
| 4nnaA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 55.0 | 4.06e-01 | 97.6% | 73.5% |
| 2x9qB00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.60 | 45.0 | 3.74e-01 | 78.7% | 83.3% |
| 2yv5A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 46.0 | 4.27e-01 | 79.5% | 84.6% |
| 1vcvA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 45.0 | 3.76e-01 | 79.5% | 82.3% |
| 6xl1A01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.59 | 40.0 | 3.78e-01 | 74.0% | 56.8% |
| 3gl3D00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 40.0 | 3.92e-01 | 78.0% | 64.2% |
| 6cblD01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 44.0 | 3.72e-01 | 79.5% | 62.2% |
| 2b81C00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.59 | 54.0 | 3.99e-01 | 100.0% | 89.0% |
| 3simA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 50.0 | 3.89e-01 | 92.9% | 86.9% |
| 5macA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.58 | 53.0 | 3.87e-01 | 99.2% | 85.0% |
| 2basB01 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.58 | 50.0 | 4.13e-01 | 93.7% | 88.5% |
| 3ceuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 43.0 | 3.68e-01 | 78.0% | 69.5% |
| 3nl6B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 45.0 | 3.77e-01 | 84.3% | 94.2% |
| 1t9hA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 4.10e-01 | 79.5% | 84.2% |
| 4g9pA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.56 | 48.0 | 3.66e-01 | 92.1% | 67.6% |
| 1lu4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 37.0 | 3.70e-01 | 78.0% | 64.2% |
| 4bwvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 40.0 | 3.27e-01 | 73.2% | 47.1% |
| 4ac9C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 4.28e-01 | 94.5% | 90.7% |
| 4xk2B00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.55 | 47.0 | 3.54e-01 | 92.1% | 47.2% |
| 2ybdA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 37.0 | 3.61e-01 | 78.7% | 60.4% |
| 3bc9A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 47.0 | 3.62e-01 | 93.7% | 71.4% |
| 2gdzA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 3.75e-01 | 94.5% | 86.1% |
| 7ntgA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.55 | 44.0 | 3.90e-01 | 84.3% | 73.4% |
| 4hd5A02 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.55 | 46.0 | 3.85e-01 | 91.3% | 68.0% |
| 3l86A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.55 | 41.0 | 3.31e-01 | 78.0% | 69.4% |
| 3tnjA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 38.0 | 3.92e-01 | 76.4% | 74.4% |
| 6fnuA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.54 | 49.0 | 3.69e-01 | 97.6% | 85.1% |
| 5dn8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 48.0 | 4.43e-01 | 96.9% | 95.7% |
| 1rqgA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 41.0 | 3.65e-01 | 79.5% | 91.2% |
| 4xltA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 45.0 | 4.58e-01 | 92.1% | 96.1% |
| 3uyiA01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.54 | 46.0 | 3.49e-01 | 92.9% | 64.9% |
| 6gs8A01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.54 | 45.0 | 3.43e-01 | 90.6% | 39.9% |
| 4rz2B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 47.0 | 3.80e-01 | 97.6% | 92.6% |
| 1kjnA00 | 3.40.50.10160 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MTH777-like | 0.54 | 46.0 | 4.40e-01 | 94.5% | 95.4% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 47.0 | 4.00e-01 | 96.1% | 93.7% |
| 3n2xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 48.0 | 3.65e-01 | 98.4% | 72.5% |
| 1pz1A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.53 | 45.0 | 3.34e-01 | 92.1% | 43.7% |
| 1mkyA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 46.0 | 4.32e-01 | 95.3% | 96.2% |
| 3cr8C02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 39.0 | 3.39e-01 | 77.2% | 57.1% |
| 4mixA00 | 3.90.550.20 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.53 | 40.0 | 3.15e-01 | 79.5% | 54.7% |
| 6w6aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 3.79e-01 | 98.4% | 83.5% |
| 3n4fA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.52 | 47.0 | 3.75e-01 | 100.0% | 84.0% |
| 1yx1A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 44.0 | 3.58e-01 | 93.7% | 72.4% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 38.0 | 3.78e-01 | 75.6% | 78.0% |
| 4n6fA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 44.0 | 3.57e-01 | 92.9% | 66.1% |
| 1xi3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 41.0 | 3.53e-01 | 85.0% | 79.2% |
| 1reqB01 | 3.20.20.240 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase | 0.51 | 45.0 | 3.17e-01 | 100.0% | 64.5% |
| 1g7sA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 3.77e-01 | 97.6% | 94.1% |
| 2rdmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 42.0 | 4.27e-01 | 92.9% | 91.9% |
| 2rbgA00 | 3.40.50.11100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 38.0 | 3.91e-01 | 79.5% | 93.5% |
| 4b3xA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 44.0 | 4.03e-01 | 96.9% | 93.0% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5067044 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.73 | 64.0 | 4.76e-01 | 92.9% | 58.3% |
| 3975681 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.72 | 66.0 | 5.01e-01 | 98.4% | 94.6% |
| 4243555 | 7514.1.1.0 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.67 | 37.0 | 3.92e-01 | 85.8% | 60.0% |
| 3982277 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.64 | 48.0 | 4.09e-01 | 78.7% | 62.4% |
| 5037787 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.64 | 38.0 | 3.29e-01 | 75.6% | 38.4% |
| 3958996 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 52.0 | 4.22e-01 | 89.8% | 98.3% |
| 3375313 | 2002.1.2.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 | 0.61 | 43.0 | 4.00e-01 | 73.2% | 79.8% |
| 3599121 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 54.0 | 4.32e-01 | 96.1% | 93.5% |
| 3711732 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.60 | 54.0 | 4.47e-01 | 97.6% | 93.8% |
| 3736293 | 7514.1.1.4 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › DmmA-like_N | 0.60 | 37.0 | 3.88e-01 | 78.0% | 67.0% |
| 3958362 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 42.0 | 4.69e-01 | 78.7% | 97.9% |
| 5035964 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.59 | 43.0 | 3.28e-01 | 75.6% | 39.7% |
| 4346140 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.59 | 43.0 | 3.48e-01 | 75.6% | 47.5% |
| 4635446 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.58 | 43.0 | 3.50e-01 | 76.4% | 46.1% |
| 4337374 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.58 | 43.0 | 3.48e-01 | 76.4% | 45.5% |
| 4312317 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.58 | 43.0 | 3.44e-01 | 76.4% | 44.2% |
| 9164 | 2003.1.1.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glyco_hydro_4 | 0.58 | 40.0 | 3.63e-01 | 70.1% | 95.3% |
| 3171586 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.58 | 51.0 | 4.17e-01 | 96.9% | 74.8% |
| 4678704 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.58 | 43.0 | 3.47e-01 | 77.2% | 45.1% |
| 4499405 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.58 | 42.0 | 3.37e-01 | 75.6% | 40.8% |
| 4990263 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 39.0 | 3.88e-01 | 76.4% | 65.7% |
| 4330589 | 2004.1.1.422 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, RsgA_GTPase | 0.57 | 50.0 | 4.35e-01 | 96.1% | 85.1% |
| 4582525 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.57 | 42.0 | 3.44e-01 | 76.4% | 45.5% |
| 4965137 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 40.0 | 3.94e-01 | 71.7% | 95.6% |
| 5020880 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.57 | 50.0 | 4.00e-01 | 96.1% | 89.8% |
| 3643559 | 2004.1.1.96 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RsgA_GTPase | 0.57 | 43.0 | 3.42e-01 | 79.5% | 64.7% |
| 3535081 | 7585.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 | 0.57 | 43.0 | 4.15e-01 | 78.7% | 74.3% |
| 3826727 | 2004.1.1.96 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RsgA_GTPase | 0.57 | 43.0 | 4.18e-01 | 79.5% | 84.9% |
| 1392469 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.57 | 48.0 | 4.11e-01 | 93.7% | 86.3% |
| 3172133 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.56 | 42.0 | 3.87e-01 | 78.0% | 70.9% |
| 4934833 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 40.0 | 4.05e-01 | 74.0% | 91.5% |
| 3604580 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 41.0 | 3.79e-01 | 75.6% | 60.6% |
| 5010573 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 38.0 | 3.79e-01 | 75.6% | 65.2% |
| 4150181 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.56 | 49.0 | 4.20e-01 | 97.6% | 92.4% |
| 4863091 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.56 | 48.0 | 4.27e-01 | 94.5% | 81.9% |
| 3479058 | 7585.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins | 0.56 | 41.0 | 4.11e-01 | 89.8% | 75.4% |
| 4051591 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.55 | 42.0 | 3.39e-01 | 78.0% | 58.3% |
| 5033556 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 41.0 | 3.98e-01 | 75.6% | 72.5% |
| 4985079 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 39.0 | 3.87e-01 | 74.8% | 68.1% |
| 4885769 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.55 | 41.0 | 3.39e-01 | 78.7% | 61.7% |
| 5024633 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 39.0 | 3.83e-01 | 75.6% | 66.4% |
| 3740444 | 7585.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 | 0.55 | 42.0 | 4.25e-01 | 79.5% | 82.4% |
| 4203886 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.55 | 40.0 | 3.14e-01 | 75.6% | 40.8% |
| 5059594 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 32.0 | 3.39e-01 | 75.6% | 64.3% |
| 5025607 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.54 | 48.0 | 4.29e-01 | 98.4% | 95.7% |
| 4982630 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.54 | 48.0 | 3.95e-01 | 98.4% | 96.2% |
| 5039199 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.54 | 37.0 | 3.51e-01 | 74.0% | 57.4% |
| 5051475 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.54 | 47.0 | 4.02e-01 | 98.4% | 88.5% |
| 3782751 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.54 | 45.0 | 3.93e-01 | 89.8% | 90.0% |
| 4044690 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.54 | 40.0 | 3.23e-01 | 78.0% | 59.6% |
| 3274210 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 36.0 | 4.02e-01 | 75.6% | 87.0% |
| 4351211 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.54 | 39.0 | 3.11e-01 | 76.4% | 40.8% |
| 5039198 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 38.0 | 3.81e-01 | 75.6% | 71.5% |
| 1260957 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 36.0 | 3.63e-01 | 74.0% | 68.5% |
| 3587606 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.53 | 45.0 | 3.40e-01 | 92.9% | 69.5% |
| 3942767 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.53 | 47.0 | 4.12e-01 | 97.6% | 93.2% |
| 3740733 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.53 | 47.0 | 3.53e-01 | 100.0% | 67.9% |
| 3206696 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.53 | 43.0 | 3.63e-01 | 89.8% | 97.8% |
| 3966575 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 45.0 | 3.56e-01 | 92.9% | 56.1% |
| 3968546 | 7579.1.1.50 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › VirJ | 0.52 | 44.0 | 3.81e-01 | 93.7% | 96.2% |
| 1291618 | 2002.1.1.138 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ThiG | 0.52 | 45.0 | 3.62e-01 | 93.7% | 54.5% |
| 349274 | 2005.1.1.32 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DUF5751 | 0.52 | 39.0 | 4.02e-01 | 79.5% | 93.5% |
| 4282149 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.51 | 38.0 | 3.95e-01 | 78.7% | 96.7% |
| 3589573 | 2007.1.4.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat | 0.51 | 41.0 | 4.27e-01 | 91.3% | 93.3% |
| 3972379 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.50 | 38.0 | 3.03e-01 | 79.5% | 68.3% |
| 3481609 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.50 | 41.0 | 3.65e-01 | 89.0% | 90.3% |