←Back to structures
PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00183
Bact-VirPH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00183
Identity
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-58
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mvfD00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.69 | 50.0 | 5.22e-01 | 81.6% | 95.5% |
| 1ub4C00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.64 | 51.0 | 4.54e-01 | 93.9% | 62.7% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.63 | 52.0 | 5.04e-01 | 100.0% | 82.5% |
| 1yfbA00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.62 | 46.0 | 4.58e-01 | 89.8% | 82.7% |
| 4ciuA04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 43.0 | 3.57e-01 | 77.6% | 87.1% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 42.0 | 3.27e-01 | 87.8% | 70.5% |
| 2l66A00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.56 | 43.0 | 4.28e-01 | 100.0% | 86.8% |
| 1s7mA03 | 2.20.25.140 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 33.0 | 3.58e-01 | 81.6% | 100.0% |
| 2kqrA01 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.55 | 46.0 | 4.04e-01 | 93.9% | 64.9% |
| 2r8rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 40.0 | 2.61e-01 | 79.6% | 18.7% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 40.0 | 2.57e-01 | 93.9% | 85.8% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.53 | 37.0 | 2.96e-01 | 75.5% | 34.0% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 37.0 | 3.00e-01 | 75.5% | 70.0% |
| 2jz6A01 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.51 | 36.0 | 3.58e-01 | 91.8% | 72.0% |
| 4b0eD00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.51 | 40.0 | 3.28e-01 | 89.8% | 65.0% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 36.0 | 2.59e-01 | 77.6% | 24.2% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035358 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.70 | 54.0 | 5.26e-01 | 87.8% | 100.0% |
| 4955687 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.69 | 54.0 | 5.35e-01 | 95.9% | 84.9% |
| 4993775 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.69 | 55.0 | 5.42e-01 | 98.0% | 83.6% |
| 5027264 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.69 | 50.0 | 4.54e-01 | 81.6% | 57.1% |
| 5060420 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.69 | 52.0 | 5.34e-01 | 83.7% | 97.8% |
| 5032296 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 52.0 | 5.10e-01 | 87.8% | 78.2% |
| 4934807 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 52.0 | 4.64e-01 | 87.8% | 57.3% |
| 4937994 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.68 | 49.0 | 5.22e-01 | 79.6% | 97.5% |
| 5074248 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.68 | 51.0 | 4.96e-01 | 87.8% | 74.5% |
| 5032072 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 51.0 | 5.02e-01 | 87.8% | 78.2% |
| 5040491 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 55.0 | 5.02e-01 | 95.9% | 68.6% |
| 4941025 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.67 | 50.0 | 5.10e-01 | 83.7% | 87.8% |
| 4085449 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 52.0 | 4.64e-01 | 89.8% | 60.0% |
| 5081177 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 52.0 | 5.40e-01 | 93.9% | 93.3% |
| 5012674 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 53.0 | 4.75e-01 | 89.8% | 62.9% |
| 4955560 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 51.0 | 5.05e-01 | 95.9% | 81.8% |
| 5065699 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.66 | 51.0 | 5.28e-01 | 87.8% | 93.3% |
| 4967502 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.66 | 48.0 | 4.97e-01 | 81.6% | 84.4% |
| 4967811 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 52.0 | 4.92e-01 | 93.9% | 71.7% |
| 3984485 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 51.0 | 4.50e-01 | 89.8% | 56.2% |
| 4936825 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 49.0 | 4.90e-01 | 89.8% | 80.0% |
| 5031928 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 51.0 | 4.96e-01 | 87.8% | 78.2% |
| 5030593 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 52.0 | 5.12e-01 | 93.9% | 85.5% |
| 4955487 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.66 | 49.0 | 5.03e-01 | 87.8% | 93.3% |
| 5059683 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 51.0 | 5.12e-01 | 93.9% | 88.0% |
| 4005331 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 50.0 | 4.99e-01 | 87.8% | 90.0% |
| 5070516 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.66 | 52.0 | 4.91e-01 | 89.8% | 73.3% |
| 5031005 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 49.0 | 4.84e-01 | 87.8% | 76.4% |
| 5031362 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 50.0 | 4.74e-01 | 89.8% | 70.0% |
| 5029188 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.65 | 50.0 | 4.92e-01 | 89.8% | 76.4% |
| 5058522 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 49.0 | 4.77e-01 | 89.8% | 74.1% |
| 5031674 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 49.0 | 4.84e-01 | 87.8% | 78.2% |
| 5076168 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.65 | 53.0 | 4.57e-01 | 100.0% | 56.5% |
| 4992345 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.65 | 48.0 | 4.93e-01 | 83.7% | 91.1% |
| 3589831 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.65 | 49.0 | 5.04e-01 | 87.8% | 91.1% |
| 4982519 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 50.0 | 5.04e-01 | 95.9% | 90.0% |
| 4928755 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 50.0 | 4.78e-01 | 87.8% | 85.0% |
| 5014382 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 50.0 | 4.52e-01 | 95.9% | 60.0% |
| 5030713 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 47.0 | 4.44e-01 | 83.7% | 63.1% |
| 4992409 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 48.0 | 4.92e-01 | 85.7% | 100.0% |
| 5031215 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.65 | 51.0 | 4.96e-01 | 93.9% | 80.0% |
| 4930879 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 48.0 | 4.78e-01 | 83.7% | 90.0% |
| 4967269 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.64 | 48.0 | 4.72e-01 | 89.8% | 76.4% |
| 5065651 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.64 | 49.0 | 4.76e-01 | 87.8% | 78.2% |
| 5079277 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 53.0 | 5.10e-01 | 98.0% | 82.8% |
| 4969278 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 46.0 | 4.71e-01 | 79.6% | 86.7% |
| 5071519 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.64 | 50.0 | 4.70e-01 | 95.9% | 69.2% |
| 5032935 | 304.8.1.112 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MazE_antitoxin | 0.64 | 53.0 | 3.91e-01 | 100.0% | 34.8% |
| 5001967 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 47.0 | 4.77e-01 | 85.7% | 88.0% |
| 4639978 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 48.0 | 4.73e-01 | 95.9% | 80.0% |
| 5073677 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.63 | 48.0 | 4.70e-01 | 89.8% | 80.0% |
| 4966339 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.63 | 48.0 | 4.61e-01 | 89.8% | 73.3% |
| 4986319 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.63 | 48.0 | 4.80e-01 | 93.9% | 84.0% |
| 4992628 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.63 | 51.0 | 5.01e-01 | 100.0% | 92.7% |
| 5080671 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.63 | 49.0 | 4.46e-01 | 89.8% | 65.7% |
| 4993826 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.63 | 45.0 | 4.57e-01 | 81.6% | 87.5% |
| 4934374 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 50.0 | 5.06e-01 | 98.0% | 90.0% |
| 4929551 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 48.0 | 4.49e-01 | 89.8% | 66.2% |
| 5079669 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 49.0 | 4.82e-01 | 95.9% | 85.5% |
| 4994020 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.62 | 51.0 | 4.88e-01 | 95.9% | 86.2% |
| 5032176 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 48.0 | 4.53e-01 | 87.8% | 78.3% |
| 4967881 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 48.0 | 4.69e-01 | 89.8% | 83.3% |
| 4967853 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 48.0 | 4.69e-01 | 89.8% | 80.0% |
| 5059110 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.61 | 45.0 | 4.64e-01 | 81.6% | 91.1% |
| 5065458 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.61 | 49.0 | 4.72e-01 | 95.9% | 80.0% |
| 4933873 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 47.0 | 4.59e-01 | 89.8% | 85.5% |
| 5072446 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.61 | 46.0 | 4.45e-01 | 89.8% | 73.3% |
| 4955477 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.61 | 43.0 | 3.80e-01 | 89.8% | 49.3% |
| 5001623 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 46.0 | 4.67e-01 | 89.8% | 94.0% |
| 1948837 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 44.0 | 4.43e-01 | 83.7% | 87.5% |
| 4966249 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 45.0 | 4.65e-01 | 87.8% | 91.1% |
| 4959387 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.60 | 43.0 | 4.38e-01 | 83.7% | 97.8% |
| 5050062 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.60 | 45.0 | 4.28e-01 | 87.8% | 70.0% |
| 5004764 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.60 | 43.0 | 4.44e-01 | 81.6% | 88.9% |
| 5031988 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.60 | 44.0 | 4.44e-01 | 85.7% | 86.0% |
| 4534384 | 1.1.3.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › SymE_toxin | 0.60 | 46.0 | 4.50e-01 | 87.8% | 92.6% |
| 3799822 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.59 | 38.0 | 4.13e-01 | 89.8% | 82.5% |
| 5078945 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.59 | 43.0 | 4.06e-01 | 85.7% | 63.1% |
| 4993713 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.59 | 47.0 | 4.62e-01 | 95.9% | 83.6% |
| 5058860 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.58 | 48.0 | 4.72e-01 | 100.0% | 94.5% |
| 4958959 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.57 | 41.0 | 4.28e-01 | 81.6% | 86.7% |
| 5079651 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.53 | 36.0 | 3.54e-01 | 73.5% | 63.6% |
| 3800826 | 1089.1.1.0 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain | 0.52 | 45.0 | 4.03e-01 | 98.0% | 68.6% |
| 4973203 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.52 | 40.0 | 4.07e-01 | 85.7% | 90.0% |
| 3711293 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 39.0 | 3.76e-01 | 93.9% | 84.6% |