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PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00231
Bact-VirPH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00231
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 65-121
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 62.0 | 5.63e-01 | 100.0% | 58.9% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.83 | 59.0 | 6.21e-01 | 100.0% | 82.7% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.82 | 60.0 | 6.20e-01 | 100.0% | 81.5% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.82 | 57.0 | 6.15e-01 | 100.0% | 87.5% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 59.0 | 6.02e-01 | 100.0% | 78.6% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 59.0 | 5.69e-01 | 100.0% | 69.8% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.77 | 52.0 | 5.65e-01 | 94.7% | 87.0% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.66 | 57.0 | 4.59e-01 | 100.0% | 50.5% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.64 | 51.0 | 4.87e-01 | 100.0% | 76.1% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 45.0 | 4.46e-01 | 100.0% | 73.3% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 53.0 | 4.72e-01 | 100.0% | 65.5% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 50.0 | 4.11e-01 | 91.2% | 66.0% |
| 4huzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 39.0 | 2.89e-01 | 93.0% | 25.2% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.60 | 45.0 | 4.44e-01 | 91.2% | 77.0% |
| 2xanA01 | 3.30.200.110 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe | 0.59 | 48.0 | 3.61e-01 | 91.2% | 73.4% |
| 6fexA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 46.0 | 3.89e-01 | 89.5% | 91.9% |
| 5utkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 43.0 | 3.75e-01 | 82.5% | 93.3% |
| 1wfuA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 3.77e-01 | 86.0% | 94.7% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.57 | 43.0 | 4.14e-01 | 100.0% | 72.7% |
| 2w1nA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 3.81e-01 | 82.5% | 93.9% |
| 1x5lA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.70e-01 | 82.5% | 94.3% |
| 1uapA00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 45.0 | 3.49e-01 | 89.5% | 63.4% |
| 5mybA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.69e-01 | 86.0% | 90.6% |
| 3wodG00 | 2.30.30.1250 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 47.0 | 3.69e-01 | 96.5% | 55.1% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.56 | 43.0 | 3.40e-01 | 86.0% | 51.2% |
| 1x5xA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.52e-01 | 86.0% | 80.7% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.55 | 43.0 | 3.60e-01 | 94.7% | 49.0% |
| 2edyA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.60e-01 | 87.7% | 84.5% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.68e-01 | 86.0% | 95.6% |
| 3r8qA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.68e-01 | 86.0% | 94.4% |
| 1x3dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.40e-01 | 86.0% | 72.9% |
| 1qg3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.45e-01 | 84.2% | 87.5% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.60e-01 | 84.2% | 94.6% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.66e-01 | 86.0% | 94.3% |
| 7y8sB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.62e-01 | 84.2% | 96.6% |
| 3r8qA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.57e-01 | 86.0% | 90.2% |
| 2geeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.61e-01 | 86.0% | 93.4% |
| 2qlvB02 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 32.0 | 3.59e-01 | 73.7% | 86.8% |
| 1xppD00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.54 | 40.0 | 3.38e-01 | 82.5% | 68.3% |
| 3tesA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.50e-01 | 86.0% | 88.3% |
| 4n5uA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.37e-01 | 86.0% | 84.3% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.64e-01 | 87.7% | 92.2% |
| 1k85A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.54e-01 | 86.0% | 89.8% |
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.53 | 40.0 | 3.08e-01 | 84.2% | 47.0% |
| 2dleA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.49e-01 | 84.2% | 93.0% |
| 1x5aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.43e-01 | 84.2% | 90.1% |
| 1fnfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.49e-01 | 86.0% | 94.4% |
| 5e55B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.32e-01 | 82.5% | 95.7% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 43.0 | 3.94e-01 | 100.0% | 80.0% |
| 2ihmB03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 39.0 | 3.19e-01 | 86.0% | 95.6% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 42.0 | 3.46e-01 | 100.0% | 60.2% |
| 5e53A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.28e-01 | 82.5% | 95.7% |
| 4n68A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.30e-01 | 86.0% | 88.9% |
| 3qt2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 37.0 | 3.25e-01 | 84.2% | 87.6% |
| 5k19A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 40.0 | 2.43e-01 | 87.7% | 19.1% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3261395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 59.0 | 5.87e-01 | 100.0% | 72.4% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.83 | 60.0 | 5.70e-01 | 100.0% | 66.2% |
| 3914746 | 4.1.1.128 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_4 | 0.81 | 59.0 | 5.48e-01 | 100.0% | 62.9% |
| 3484822 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.79 | 61.0 | 5.39e-01 | 100.0% | 58.7% |
| 3451171 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 61.0 | 5.80e-01 | 100.0% | 72.3% |
| 3928711 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 60.0 | 5.24e-01 | 100.0% | 55.3% |
| 3231154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 58.0 | 5.19e-01 | 100.0% | 58.7% |
| 3482559 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 68.0 | 4.79e-01 | 100.0% | 52.9% |
| 5065747 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.75 | 55.0 | 4.71e-01 | 100.0% | 50.0% |
| 3964733 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 51.0 | 5.23e-01 | 100.0% | 76.4% |
| 3275404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 53.0 | 5.24e-01 | 100.0% | 75.0% |
| 4033182 | 4.1.1.61 ↗ | beta barrels › SH3 › SH3 › SH3 › KapB | 0.72 | 65.0 | 5.04e-01 | 100.0% | 58.3% |
| 3354387 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.72 | 66.0 | 5.70e-01 | 100.0% | 78.8% |
| 3839042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 44.0 | 4.85e-01 | 91.2% | 80.0% |
| 4317167 | 4.1.1.52 ↗ | beta barrels › SH3 › SH3 › SH3 › ZapC_C | 0.70 | 62.0 | 5.50e-01 | 100.0% | 68.8% |
| 4645538 | 4.1.1.52 ↗ | beta barrels › SH3 › SH3 › SH3 › ZapC_C | 0.70 | 60.0 | 5.47e-01 | 100.0% | 72.0% |
| 3576940 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 61.0 | 3.97e-01 | 100.0% | 27.1% |
| 3827886 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.66 | 58.0 | 5.24e-01 | 100.0% | 78.8% |
| 3801650 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 59.0 | 5.05e-01 | 100.0% | 68.9% |
| 3600929 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 59.0 | 5.13e-01 | 100.0% | 70.6% |
| 3480657 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 57.0 | 4.39e-01 | 100.0% | 64.0% |
| 5050325 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.63 | 49.0 | 3.12e-01 | 87.7% | 16.8% |
| 4228570 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 54.0 | 4.86e-01 | 100.0% | 75.0% |
| 3213653 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.61 | 54.0 | 4.85e-01 | 100.0% | 90.0% |
| 3624228 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.61 | 54.0 | 4.92e-01 | 100.0% | 92.0% |
| 3489469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 53.0 | 4.34e-01 | 100.0% | 77.1% |
| 4952498 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.60 | 53.0 | 4.46e-01 | 100.0% | 58.6% |
| 3482796 | 6070.1.1.0 ↗ | few secondary structure elements › Sortilin C-terminal domain › Sortilin C-terminal domain › Sortilin C-terminal domain | 0.58 | 39.0 | 4.35e-01 | 78.9% | 100.0% |
| 3586192 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.58 | 47.0 | 4.33e-01 | 96.5% | 68.0% |
| 3400271 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 44.0 | 3.54e-01 | 86.0% | 90.8% |
| 3719783 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 49.0 | 4.19e-01 | 100.0% | 72.3% |
| 3757488 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 41.0 | 3.85e-01 | 78.9% | 90.0% |
| 3787569 | 220.1.1.43 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH | 0.56 | 49.0 | 3.77e-01 | 100.0% | 73.8% |
| 3260972 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 47.0 | 3.81e-01 | 100.0% | 71.7% |
| 3210606 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.55 | 48.0 | 3.79e-01 | 100.0% | 70.4% |
| 4233484 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 44.0 | 3.94e-01 | 87.7% | 65.0% |
| 3263342 | 109.21.1.4 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Sec16_C,Sec16 | 0.55 | 39.0 | 2.36e-01 | 77.2% | 11.0% |
| 4224495 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.54 | 46.0 | 4.09e-01 | 98.2% | 87.1% |
| 5039195 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.54 | 44.0 | 3.10e-01 | 96.5% | 33.0% |
| 3483343 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 47.0 | 3.65e-01 | 100.0% | 85.4% |
| 3621272 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.54 | 45.0 | 3.50e-01 | 96.5% | 41.5% |
| 4534661 | 109.21.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Sec16_C | 0.54 | 38.0 | 2.31e-01 | 78.9% | 10.2% |
| 5011833 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 36.0 | 2.97e-01 | 89.5% | 38.1% |
| 3856800 | 102.1.3.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › PAP_assoc | 0.53 | 45.0 | 3.06e-01 | 100.0% | 50.6% |
| 3580218 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.08e-01 | 93.0% | 82.2% |
| 3721787 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 45.0 | 4.04e-01 | 100.0% | 70.6% |
| 5076855 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 41.0 | 3.47e-01 | 94.7% | 84.3% |
| 3908608 | 6070.1.1.2 ↗ | few secondary structure elements › Sortilin C-terminal domain › Sortilin C-terminal domain › Sortilin C-terminal domain › ELAPOR1_C | 0.51 | 35.0 | 3.65e-01 | 80.7% | 84.0% |
| 4092211 | 80.1.1.0 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain | 0.51 | 40.0 | 3.42e-01 | 87.7% | 98.9% |
| 3476563 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 43.0 | 3.46e-01 | 100.0% | 73.3% |
| 4409019 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 41.0 | 3.80e-01 | 96.5% | 72.5% |
| 3869919 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 38.0 | 2.98e-01 | 87.7% | 64.8% |