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PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00240

Bact-Vir

PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00240

Identity

Kingdom:
phage

Quality

96.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 14-69_91-124
PDB
Domain cluster: representative
D2 medium residues 70-90_125-211
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.55 26.0 3.50e-01 79.6% 92.2%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.54 26.0 3.46e-01 79.6% 92.2%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 29.0 3.40e-01 79.6% 80.6%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 37.0 3.73e-01 79.6% 72.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5051952 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.57 36.0 3.61e-01 76.9% 61.8%
4532614 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.53 29.0 3.54e-01 80.6% 87.7%
4344482 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 21.0 3.04e-01 75.9% 88.9%
3717380 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.50 32.0 3.55e-01 79.6% 85.0%