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PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00254
Bact-VirPH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00254
Identity
- Kingdom:
- phage
Quality
62.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-45
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qjfB01 | 6.10.140.10 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 38.0 | 3.58e-01 | 97.7% | 46.3% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 50.0 | 3.86e-01 | 88.4% | 52.0% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 43.0 | 3.41e-01 | 76.7% | 45.8% |
| 1suiA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 50.0 | 3.20e-01 | 97.7% | 51.1% |
| 1miwA04 | 1.10.246.80 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.57 | 45.0 | 3.97e-01 | 88.4% | 95.3% |
| 6le1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 46.0 | 3.95e-01 | 95.3% | 77.9% |
| 1z4hA01 | 1.10.238.160 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.53 | 40.0 | 3.64e-01 | 81.4% | 93.1% |
| 4annA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 40.0 | 2.84e-01 | 100.0% | 65.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3167418 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.73 | 52.0 | 5.14e-01 | 86.0% | 73.3% |
| 3703253 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.70 | 49.0 | 3.15e-01 | 74.4% | 86.7% |
| 3256369 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.66 | 48.0 | 4.01e-01 | 76.7% | 80.0% |
| 4944614 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.60 | 48.0 | 2.87e-01 | 90.7% | 67.7% |
| 4967672 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.57 | 44.0 | 3.07e-01 | 83.7% | 53.6% |
| 4560874 | 605.1.1.154 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › MARCHF6_C | 0.57 | 45.0 | 3.14e-01 | 90.7% | 46.3% |
| 3988812 | 614.1.1.27 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › DDE_Tnp_1 | 0.52 | 41.0 | 3.49e-01 | 97.7% | 51.2% |