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PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00342
Bact-VirPH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00342
Identity
- Kingdom:
- phage
Quality
93.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-75_179-262
Domain cluster:
representative
CATH (82)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4xvhA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.82 | 77.0 | 6.76e-01 | 100.0% | 97.3% |
| 2w9xA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.82 | 77.0 | 6.71e-01 | 100.0% | 94.7% |
| 4rshA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.82 | 76.0 | 7.29e-01 | 98.1% | 98.9% |
| 4rw0A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.82 | 77.0 | 7.25e-01 | 100.0% | 98.4% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.81 | 76.0 | 6.46e-01 | 100.0% | 95.1% |
| 1ivnA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.80 | 75.0 | 7.12e-01 | 100.0% | 97.8% |
| 1k7cA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.79 | 75.0 | 6.43e-01 | 100.0% | 94.8% |
| 3skvA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.78 | 73.0 | 6.68e-01 | 100.0% | 98.5% |
| 4s1pA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.78 | 73.0 | 6.88e-01 | 98.7% | 98.4% |
| 4q9aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.78 | 73.0 | 6.41e-01 | 99.4% | 95.0% |
| 1efaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.76 | 56.0 | 6.15e-01 | 100.0% | 92.9% |
| 7br2D01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.76 | 70.0 | 6.22e-01 | 98.7% | 94.0% |
| 1tjyA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.75 | 57.0 | 5.69e-01 | 100.0% | 75.5% |
| 2h3hA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 58.0 | 6.02e-01 | 100.0% | 85.8% |
| 3d8uB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 54.0 | 6.06e-01 | 100.0% | 97.5% |
| 4rxtA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 57.0 | 6.04e-01 | 100.0% | 92.0% |
| 2rjoA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 58.0 | 5.92e-01 | 100.0% | 89.3% |
| 5a4aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 66.0 | 5.91e-01 | 99.4% | 88.9% |
| 4pevA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 53.0 | 5.77e-01 | 100.0% | 93.1% |
| 4joqA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 55.0 | 5.81e-01 | 100.0% | 90.1% |
| 3h75A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 57.0 | 5.34e-01 | 100.0% | 70.4% |
| 1jx6A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 56.0 | 5.31e-01 | 100.0% | 72.5% |
| 4yleA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 56.0 | 5.96e-01 | 100.0% | 97.1% |
| 3hcwA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 53.0 | 5.62e-01 | 100.0% | 90.7% |
| 2b99C00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.69 | 56.0 | 5.73e-01 | 100.0% | 88.2% |
| 4j07A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.68 | 55.0 | 5.60e-01 | 100.0% | 86.2% |
| 3bblA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 52.0 | 5.45e-01 | 100.0% | 90.6% |
| 1di0A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.67 | 55.0 | 5.67e-01 | 100.0% | 91.9% |
| 4f6cB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 61.0 | 4.61e-01 | 100.0% | 65.5% |
| 3epnB01 | 3.20.20.540 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Radical SAM ThiC family, central domain | 0.66 | 55.0 | 4.43e-01 | 89.7% | 91.5% |
| 1c2yA00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.66 | 54.0 | 5.44e-01 | 100.0% | 87.1% |
| 4xfkA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 58.0 | 5.26e-01 | 100.0% | 88.4% |
| 1d7aA00 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 50.0 | 5.02e-01 | 100.0% | 80.7% |
| 1k70A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 55.0 | 4.43e-01 | 94.9% | 97.7% |
| 3a9iA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 52.0 | 4.34e-01 | 87.2% | 84.8% |
| 2aeuA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 50.0 | 4.47e-01 | 99.4% | 59.9% |
| 3hcwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 47.0 | 4.88e-01 | 100.0% | 84.6% |
| 3cqjA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.62 | 53.0 | 4.39e-01 | 91.7% | 85.9% |
| 3wqoA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.62 | 55.0 | 4.52e-01 | 94.2% | 86.7% |
| 1ez4B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 46.0 | 4.73e-01 | 76.9% | 95.9% |
| 3vylA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.61 | 50.0 | 4.08e-01 | 88.5% | 91.2% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.61 | 47.0 | 5.09e-01 | 96.8% | 97.0% |
| 2nv9D02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.60 | 45.0 | 3.98e-01 | 76.9% | 90.7% |
| 3qc0A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.60 | 52.0 | 4.34e-01 | 93.6% | 85.7% |
| 4ovxA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.60 | 50.0 | 4.16e-01 | 88.5% | 94.4% |
| 3c5cB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 55.0 | 5.40e-01 | 100.0% | 99.4% |
| 3tvaA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.60 | 54.0 | 4.46e-01 | 98.7% | 85.5% |
| 3cz8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 49.0 | 4.22e-01 | 87.8% | 95.9% |
| 1dxeA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.59 | 47.0 | 3.97e-01 | 82.1% | 92.9% |
| 4gm6A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 54.0 | 4.28e-01 | 100.0% | 87.2% |
| 2qw5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.59 | 48.0 | 3.83e-01 | 87.8% | 95.4% |
| 1t7lB01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.59 | 49.0 | 3.77e-01 | 91.7% | 90.2% |
| 3lhxA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 53.0 | 4.31e-01 | 100.0% | 91.0% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 51.0 | 4.67e-01 | 94.9% | 95.6% |
| 2wmfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 52.0 | 4.11e-01 | 99.4% | 87.0% |
| 3f4nC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 49.0 | 4.17e-01 | 89.1% | 92.6% |
| 2wmiA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 52.0 | 4.00e-01 | 100.0% | 87.8% |
| 5tnvA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 53.0 | 4.22e-01 | 100.0% | 87.3% |
| 1xrtA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 51.0 | 4.37e-01 | 98.1% | 96.1% |
| 1n7kA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 49.0 | 4.27e-01 | 91.0% | 82.1% |
| 2cjwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 52.0 | 5.02e-01 | 100.0% | 88.8% |
| 1myrA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 52.0 | 3.64e-01 | 100.0% | 84.6% |
| 6d2xA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 49.0 | 3.87e-01 | 94.2% | 91.0% |
| 1vcvA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 48.0 | 4.28e-01 | 94.2% | 91.6% |
| 2bgwB01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 43.0 | 4.65e-01 | 99.4% | 96.9% |
| 1vliA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 49.0 | 3.99e-01 | 96.8% | 85.7% |
| 3er6A00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.55 | 50.0 | 4.69e-01 | 99.4% | 90.6% |
| 4as2A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 46.0 | 4.13e-01 | 91.0% | 88.4% |
| 1i1nA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 41.0 | 3.62e-01 | 78.2% | 59.8% |
| 3zm8A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 48.0 | 3.85e-01 | 98.1% | 94.3% |
| 1ymyB02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 46.0 | 4.06e-01 | 94.9% | 98.8% |
| 6uczB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.53 | 47.0 | 3.95e-01 | 96.2% | 90.9% |
| 3h6gA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 47.0 | 4.58e-01 | 100.0% | 88.7% |
| 2pgnA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.53 | 48.0 | 4.52e-01 | 98.7% | 88.2% |
| 3slkA02 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.53 | 43.0 | 3.42e-01 | 89.7% | 41.9% |
| 3i4kA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.52 | 47.0 | 3.97e-01 | 96.2% | 74.6% |
| 2kg4A00 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.52 | 40.0 | 3.96e-01 | 87.2% | 75.8% |
| 2chrA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.52 | 47.0 | 4.31e-01 | 98.7% | 93.1% |
| 3ombA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 45.0 | 4.09e-01 | 95.5% | 92.9% |
| 4o1eB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.51 | 45.0 | 3.79e-01 | 95.5% | 82.8% |
| 2xb4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 45.0 | 4.00e-01 | 98.1% | 100.0% |
| 2qtlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.50 | 39.0 | 3.92e-01 | 80.8% | 100.0% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3284969 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.85 | 81.0 | 6.85e-01 | 100.0% | 95.8% |
| 3956588 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.85 | 81.0 | 6.90e-01 | 100.0% | 97.9% |
| 10062 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.82 | 77.0 | 6.50e-01 | 100.0% | 94.8% |
| 1411712 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.82 | 76.0 | 7.29e-01 | 98.1% | 98.9% |
| 3983672 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.80 | 75.0 | 7.01e-01 | 100.0% | 93.1% |
| 1645862 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.74 | 50.0 | 5.73e-01 | 76.3% | 93.0% |
| 4042980 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.71 | 51.0 | 5.28e-01 | 100.0% | 78.6% |
| 3278814 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.71 | 58.0 | 6.06e-01 | 100.0% | 93.1% |
| 4007641 | 2007.1.2.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_1 | 0.70 | 55.0 | 5.92e-01 | 100.0% | 94.8% |
| 3576102 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.70 | 50.0 | 4.98e-01 | 100.0% | 71.2% |
| 4494958 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.70 | 56.0 | 5.49e-01 | 100.0% | 78.8% |
| 4997440 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.69 | 40.0 | 4.35e-01 | 94.2% | 67.7% |
| 3743556 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.68 | 55.0 | 5.43e-01 | 100.0% | 80.0% |
| 1253089 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.68 | 45.0 | 5.29e-01 | 78.8% | 97.2% |
| 4927931 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.67 | 53.0 | 5.61e-01 | 100.0% | 92.0% |
| 3962229 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.67 | 52.0 | 4.82e-01 | 98.1% | 63.0% |
| 4975785 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.67 | 55.0 | 5.56e-01 | 100.0% | 86.5% |
| 5038863 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.67 | 56.0 | 5.54e-01 | 100.0% | 83.6% |
| 3781249 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 62.0 | 5.80e-01 | 100.0% | 95.3% |
| 4950705 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 38.0 | 4.16e-01 | 96.2% | 66.9% |
| 3616325 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.66 | 48.0 | 4.83e-01 | 100.0% | 73.1% |
| 3713746 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.66 | 37.0 | 4.10e-01 | 96.8% | 67.2% |
| 5068744 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.65 | 59.0 | 5.85e-01 | 100.0% | 93.1% |
| 4381755 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.65 | 59.0 | 4.64e-01 | 99.4% | 87.7% |
| 4942829 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.64 | 54.0 | 5.14e-01 | 100.0% | 76.7% |
| 5082437 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 52.0 | 4.17e-01 | 85.3% | 92.9% |
| 3586624 | 7590.1.1.6 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid | 0.64 | 48.0 | 4.74e-01 | 100.0% | 73.9% |
| 3972385 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.64 | 55.0 | 4.26e-01 | 94.9% | 84.2% |
| 5029061 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.64 | 41.0 | 4.44e-01 | 100.0% | 76.9% |
| 5029560 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 50.0 | 4.05e-01 | 82.7% | 73.1% |
| 3746360 | 2002.1.1.67 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pro_dh | 0.63 | 49.0 | 3.68e-01 | 82.1% | 77.9% |
| 5066284 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.62 | 39.0 | 4.29e-01 | 75.6% | 75.4% |
| 5040896 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.62 | 39.0 | 4.18e-01 | 100.0% | 71.9% |
| 5057046 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.62 | 54.0 | 4.48e-01 | 94.2% | 80.7% |
| 3223608 | 2004.1.1.534 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF30386 | 0.61 | 48.0 | 4.25e-01 | 82.1% | 72.0% |
| 1839421 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.61 | 52.0 | 4.13e-01 | 92.3% | 91.2% |
| 1289505 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.60 | 51.0 | 3.99e-01 | 91.0% | 96.7% |
| 5023834 | 7574.1.1.5 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C | 0.60 | 49.0 | 4.89e-01 | 100.0% | 83.7% |
| 5012786 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.60 | 52.0 | 4.36e-01 | 93.6% | 88.1% |
| 4988570 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.60 | 37.0 | 4.09e-01 | 95.5% | 77.5% |
| 3180690 | 2007.1.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Peptidase_S66 | 0.60 | 53.0 | 5.23e-01 | 100.0% | 90.6% |
| 3502108 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.60 | 54.0 | 5.20e-01 | 99.4% | 94.4% |
| 3262737 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.60 | 54.0 | 4.54e-01 | 100.0% | 96.7% |
| 3955367 | 2003.1.1.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N | 0.59 | 53.0 | 5.03e-01 | 97.4% | 97.8% |
| 3787119 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 46.0 | 4.76e-01 | 100.0% | 87.6% |
| 4115593 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.59 | 51.0 | 4.03e-01 | 94.2% | 97.2% |
| 4476644 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.59 | 49.0 | 4.15e-01 | 100.0% | 53.8% |
| 3849833 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 50.0 | 4.74e-01 | 100.0% | 78.3% |
| 3940941 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.58 | 54.0 | 3.02e-01 | 100.0% | 9.9% |
| 3796939 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.58 | 53.0 | 4.66e-01 | 100.0% | 77.8% |
| 3993940 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.58 | 53.0 | 4.76e-01 | 100.0% | 80.5% |
| 3929019 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.58 | 53.0 | 4.95e-01 | 100.0% | 95.3% |
| 4174733 | 2002.1.1.116 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PdxJ | 0.58 | 48.0 | 4.17e-01 | 89.7% | 92.2% |
| 3941413 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.58 | 52.0 | 4.51e-01 | 100.0% | 95.1% |
| 3479057 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.57 | 52.0 | 5.20e-01 | 100.0% | 98.1% |
| 4855623 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.57 | 39.0 | 3.73e-01 | 100.0% | 58.0% |
| 4530056 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.56 | 52.0 | 4.97e-01 | 100.0% | 93.9% |
| 4015063 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 50.0 | 4.11e-01 | 98.1% | 97.2% |
| 4033672 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 45.0 | 4.80e-01 | 87.2% | 98.5% |
| 3925779 | 7516.1.1.37 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN | 0.55 | 39.0 | 3.19e-01 | 71.2% | 74.2% |
| 4021060 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.55 | 42.0 | 4.05e-01 | 98.1% | 69.4% |
| 2983286 | 7592.1.1.8 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF_Card1 | 0.54 | 39.0 | 4.05e-01 | 91.7% | 79.5% |
| 4564199 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.54 | 49.0 | 4.30e-01 | 100.0% | 88.9% |
| 4508413 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.53 | 47.0 | 3.69e-01 | 96.2% | 85.6% |
| 3334050 | 2002.1.1.50 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › F_bP_aldolase | 0.53 | 47.0 | 3.91e-01 | 98.7% | 97.9% |
| 4422639 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 48.0 | 3.77e-01 | 97.4% | 59.7% |
| 4308615 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.52 | 42.0 | 4.43e-01 | 99.4% | 99.3% |
| 3311403 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.52 | 45.0 | 3.40e-01 | 96.2% | 70.7% |
| 3193985 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.52 | 47.0 | 4.22e-01 | 100.0% | 77.3% |
| 5001015 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.52 | 42.0 | 3.49e-01 | 87.2% | 63.6% |
| 3270546 | 2003.1.5.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 | 0.52 | 36.0 | 2.97e-01 | 71.2% | 45.3% |
| 3726164 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.51 | 41.0 | 3.82e-01 | 83.3% | 79.5% |
| 3384055 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 41.0 | 2.97e-01 | 86.5% | 57.7% |
| 5014251 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.51 | 46.0 | 3.54e-01 | 99.4% | 92.8% |
| 3910990 | 7516.1.1.37 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN | 0.51 | 39.0 | 3.29e-01 | 80.8% | 80.6% |
| 3165505 | 2486.1.1.13 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49+Peptidase_S49_N | 0.50 | 44.0 | 3.37e-01 | 92.3% | 76.2% |
D2
high
residues 78-178
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zmbA02 | 6.10.170.10 | Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.60 | 24.0 | 3.66e-01 | 100.0% | 100.0% |
| 3icxA02 | 1.10.150.460 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.56 | 30.0 | 3.91e-01 | 99.0% | 100.0% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 28.0 | 3.52e-01 | 84.2% | 83.9% |
| 2vkhA03 | 1.10.10.1780 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 34.0 | 4.03e-01 | 100.0% | 95.7% |
| 1dk5A04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.52 | 25.0 | 2.93e-01 | 98.0% | 62.9% |
| 4bxoA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.51 | 30.0 | 3.53e-01 | 99.0% | 85.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5017963 | 3826.1.1.101 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF6141 | 0.67 | 33.0 | 4.22e-01 | 100.0% | 80.0% |
| 3587017 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.62 | 29.0 | 4.16e-01 | 100.0% | 100.0% |
| 3983783 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.54 | 30.0 | 3.08e-01 | 77.2% | 55.8% |
| 3366473 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.51 | 27.0 | 3.51e-01 | 95.0% | 100.0% |
| 3288179 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.50 | 39.0 | 3.07e-01 | 85.1% | 67.8% |