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PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00432
Bact-VirPH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00432
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-134
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fvqA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 32.0 | 4.17e-01 | 76.5% | 95.8% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.57 | 32.0 | 4.08e-01 | 77.3% | 96.1% |
| 7uvpA02 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.56 | 31.0 | 3.96e-01 | 77.3% | 100.0% |
| 2gu0A02 | 3.30.428.20 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain | 0.55 | 31.0 | 2.97e-01 | 97.7% | 45.3% |
| 2kkhA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 31.0 | 4.00e-01 | 81.8% | 100.0% |
| 3apaA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.54 | 31.0 | 3.10e-01 | 81.1% | 51.4% |
| 4mamA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 29.0 | 3.62e-01 | 99.2% | 87.7% |
| 3ui3A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 31.0 | 3.54e-01 | 78.0% | 82.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3738592 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.70 | 65.0 | 6.02e-01 | 100.0% | 95.2% |
| 3838249 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.60 | 35.0 | 4.35e-01 | 84.8% | 91.8% |
| 5040248 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.59 | 33.0 | 4.19e-01 | 77.3% | 96.0% |
| 3738385 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.58 | 33.0 | 4.06e-01 | 76.5% | 88.2% |
| 5083546 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.58 | 33.0 | 4.06e-01 | 83.3% | 91.3% |
| 3601388 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.57 | 33.0 | 4.22e-01 | 77.3% | 100.0% |
| 3786220 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.57 | 32.0 | 3.83e-01 | 81.1% | 83.5% |
| 3958992 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.57 | 33.0 | 4.10e-01 | 78.8% | 95.0% |
| 4285070 | 304.24.1.4 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › RF3_C | 0.56 | 32.0 | 3.90e-01 | 78.0% | 91.3% |
| 4107410 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.55 | 31.0 | 3.88e-01 | 76.5% | 94.7% |
| 4025415 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.55 | 30.0 | 3.97e-01 | 83.3% | 100.0% |
| 4407103 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.55 | 27.0 | 3.70e-01 | 78.8% | 100.0% |
| 4105204 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.55 | 31.0 | 3.83e-01 | 77.3% | 91.3% |
| 3578641 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.55 | 29.0 | 3.76e-01 | 77.3% | 94.3% |
| 5025092 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.55 | 30.0 | 3.67e-01 | 87.9% | 89.3% |
| 3593735 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.54 | 27.0 | 3.67e-01 | 82.6% | 95.4% |
| 1697864 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.53 | 31.0 | 3.70e-01 | 78.8% | 91.5% |
| 4051394 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 28.0 | 3.66e-01 | 83.3% | 98.6% |
| 4563340 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 27.0 | 3.43e-01 | 81.1% | 94.3% |