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PH2015_22_scaffold_1_prodigal-single.1__X__X__00043
Bact-VirPH2015_22_scaffold_1_prodigal-single.1__X__X__00043
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-102
Domain cluster:
rep: MT939492.1__QNR51846.1__Xoosp14_155__00155__D10-91
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k5fA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.63 | 41.0 | 4.35e-01 | 100.0% | 75.9% |
| 4b9wA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 44.0 | 4.26e-01 | 76.8% | 80.6% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 32.0 | 3.26e-01 | 89.5% | 51.5% |
| 1u04A02 | 3.90.70.180 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.58 | 49.0 | 4.70e-01 | 95.8% | 81.2% |
| 4bb7B00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.56 | 42.0 | 3.12e-01 | 100.0% | 32.1% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 39.0 | 3.70e-01 | 96.8% | 62.4% |
| 1luzA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 38.0 | 4.03e-01 | 75.8% | 87.1% |
| 2r1iA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 39.0 | 3.55e-01 | 80.0% | 99.2% |
| 1jeyA02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.50 | 44.0 | 3.99e-01 | 95.8% | 84.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5034832 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 48.0 | 5.49e-01 | 100.0% | 87.1% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.71 | 45.0 | 4.98e-01 | 100.0% | 81.3% |
| 4996612 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 62.0 | 5.72e-01 | 100.0% | 82.5% |
| 3591211 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 4.44e-01 | 100.0% | 83.7% |
| 3223881 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.59 | 45.0 | 4.17e-01 | 88.4% | 64.2% |
| 3869355 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.58 | 42.0 | 3.76e-01 | 77.9% | 67.9% |
| 4023463 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.57 | 44.0 | 3.81e-01 | 82.1% | 79.3% |
| 3877939 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.57 | 42.0 | 3.91e-01 | 76.8% | 78.3% |
| 4027374 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.57 | 50.0 | 3.59e-01 | 100.0% | 39.0% |
| 5041077 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 42.0 | 3.43e-01 | 81.1% | 87.4% |
| 3896148 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.56 | 41.0 | 4.03e-01 | 77.9% | 83.8% |
| 3414045 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.56 | 41.0 | 4.23e-01 | 77.9% | 87.8% |
| 4928364 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 41.0 | 3.69e-01 | 80.0% | 97.1% |
| 4459066 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.55 | 41.0 | 3.64e-01 | 78.9% | 64.3% |
| 3737805 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.54 | 40.0 | 4.42e-01 | 100.0% | 100.0% |
| 3619973 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 38.0 | 4.09e-01 | 92.6% | 91.3% |
| 3483770 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.52 | 34.0 | 2.91e-01 | 95.8% | 37.6% |
| 3620141 | 922.1.1.7 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_ADAMTS | 0.52 | 26.0 | 3.07e-01 | 77.9% | 69.2% |
| 3443063 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.52 | 39.0 | 3.25e-01 | 82.1% | 81.7% |
| 3239069 | 5001.1.1.25 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Sru | 0.51 | 43.0 | 3.07e-01 | 94.7% | 63.2% |
| 3265360 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.51 | 40.0 | 3.40e-01 | 86.3% | 96.2% |
| 3797744 | 3781.1.1.0 ↗ | a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain | 0.50 | 36.0 | 3.90e-01 | 90.5% | 96.0% |
| 2831772 | 2.1.1.65 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB_2 | 0.50 | 36.0 | 3.45e-01 | 76.8% | 100.0% |
D2
medium
residues 105-175
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ar1A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 42.0 | 3.02e-01 | 78.9% | 69.3% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 4.32e-01 | 100.0% | 82.4% |
| 3n4rA00 | 3.90.1150.80 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.56 | 38.0 | 3.51e-01 | 98.6% | 53.8% |
| 2hvfA00 | 3.40.5.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › Ribosomal protein L9, N-terminal domain | 0.55 | 27.0 | 3.16e-01 | 90.1% | 65.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3736591 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 34.0 | 3.65e-01 | 77.5% | 65.0% |
| 3924077 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.56 | 40.0 | 3.89e-01 | 90.1% | 66.3% |
| 3442608 | 304.20.1.1 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind | 0.55 | 39.0 | 3.22e-01 | 76.1% | 57.1% |
| 3935731 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.52 | 44.0 | 3.03e-01 | 100.0% | 79.0% |