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PH2015_22_scaffold_1_prodigal-single.1__X__X__00062

Bact-Vir

PH2015_22_scaffold_1_prodigal-single.1__X__X__00062

Identity

Kingdom:
phage

Quality

85.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-65
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ep3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 45.0 3.01e-01 100.0% 73.6%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.54 40.0 3.23e-01 82.0% 49.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3680215 109.4.1.880 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LTN1_E3_ligase_6th 0.56 48.0 2.76e-01 100.0% 52.1%
3591799 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.55 34.0 3.40e-01 72.1% 60.0%
5010443 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.54 45.0 2.79e-01 100.0% 38.9%
3168582 3771.1.1.1 ↗ a+b two layers › Central kinetochore subunit CHL4 C-terminal domain › Central kinetochore subunit CHL4 C-terminal domain › Central kinetochore subunit CHL4 C-terminal domain › CENP-N 0.51 35.0 3.43e-01 72.1% 78.6%