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PH2015_22_scaffold_1_prodigal-single.1__X__X__00166

Bact-Vir

PH2015_22_scaffold_1_prodigal-single.1__X__X__00166

Identity

Kingdom:
phage

Quality

76.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 66-165
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00574.29 best CLP_protease 42.5 9.10e-11 96.0% 43.4%
CATH (88)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y7oB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.84 75.0 6.00e-01 100.0% 52.8%
5e0sB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.83 74.0 5.72e-01 100.0% 46.8%
4jcqA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.83 74.0 6.00e-01 99.0% 54.7%
3bf0C03 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.83 74.0 6.15e-01 96.0% 61.7%
7ekqA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.82 73.0 5.73e-01 100.0% 49.5%
3lkeB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.79 73.0 5.35e-01 100.0% 49.0%
4lk5A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.79 73.0 5.41e-01 100.0% 45.4%
3p5mB01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.79 73.0 5.95e-01 100.0% 63.3%
3r6hA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.78 73.0 5.49e-01 100.0% 50.2%
2deoB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.78 68.0 5.31e-01 94.0% 46.5%
1sg4A01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.78 72.0 5.59e-01 100.0% 58.6%
3bptA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.78 72.0 4.80e-01 100.0% 33.4%
4l6wA02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 72.0 5.56e-01 100.0% 52.2%
2f9iC00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 72.0 5.02e-01 100.0% 39.7%
1ef8A02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 72.0 5.83e-01 100.0% 63.1%
4mouA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 72.0 5.58e-01 100.0% 58.0%
3g64A01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 72.0 5.48e-01 100.0% 56.3%
3gkbA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 72.0 5.11e-01 100.0% 44.9%
4og1A01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 71.0 5.60e-01 100.0% 57.3%
2a7kB01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 71.0 5.61e-01 100.0% 60.9%
3oc7A01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 71.0 5.77e-01 100.0% 64.8%
5wydA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.77 71.0 5.53e-01 100.0% 57.8%
1o0uA02 3.40.50.10180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycerate kinase, MOFRL-like N-terminal domain 0.77 65.0 4.92e-01 91.0% 92.5%
4k3wA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.76 70.0 5.46e-01 100.0% 60.9%
3zwbA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.76 71.0 5.01e-01 100.0% 39.8%
3njdA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.76 71.0 4.96e-01 100.0% 45.9%
4kd6A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.76 70.0 5.37e-01 100.0% 49.8%
4wczC01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.76 70.0 5.52e-01 100.0% 61.2%
3omeB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.76 69.0 5.16e-01 100.0% 47.5%
4jwvA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.75 70.0 5.51e-01 100.0% 56.6%
5c9gF01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.74 69.0 5.34e-01 100.0% 58.5%
1hnuA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.74 68.0 5.02e-01 100.0% 46.0%
1o8uC00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.72 66.0 4.90e-01 100.0% 47.4%
1xm7A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.69 58.0 4.71e-01 92.0% 52.2%
5nusA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.68 58.0 4.58e-01 94.0% 91.5%
2ookA00 3.40.50.10600 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SpoIIaa-like domains 0.67 59.0 5.55e-01 100.0% 84.8%
2vtfA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 58.0 4.00e-01 100.0% 40.5%
6ilsA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.62 53.0 3.74e-01 93.0% 60.3%
5djsA02 3.40.50.11380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 46.0 3.73e-01 91.0% 41.5%
3pfmA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.62 54.0 4.14e-01 100.0% 56.4%
3u80A00 3.40.50.9100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II 0.61 52.0 4.85e-01 94.0% 84.3%
5kinC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 54.0 4.07e-01 100.0% 50.8%
4yrbA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 54.0 4.29e-01 100.0% 85.0%
2podA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.60 52.0 3.96e-01 99.0% 46.1%
2yvaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 51.0 4.15e-01 94.0% 64.8%
1jqlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 51.0 4.62e-01 94.0% 67.9%
3px5A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.60 53.0 4.03e-01 100.0% 51.6%
6pwkA02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.60 52.0 4.06e-01 100.0% 48.1%
5y58B01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.60 48.0 4.02e-01 89.0% 94.4%
3okpA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 53.0 4.33e-01 100.0% 83.6%
3iv3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 51.0 3.64e-01 100.0% 44.2%
2ze3A01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.58 51.0 4.00e-01 100.0% 55.2%
2basB01 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.58 51.0 4.00e-01 100.0% 50.0%
3hv8A00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.58 50.0 3.89e-01 99.0% 63.6%
3thxB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 51.0 3.81e-01 98.0% 44.0%
4n4pD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 50.0 3.72e-01 100.0% 43.8%
3qz6A00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.58 51.0 3.82e-01 100.0% 54.1%
4mm1C00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.58 51.0 3.92e-01 99.0% 54.7%
1to3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 50.0 3.66e-01 99.0% 43.0%
4jejA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.57 51.0 3.89e-01 100.0% 53.1%
3fxaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 48.0 3.87e-01 92.0% 51.3%
1jvnA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 50.0 3.61e-01 99.0% 53.7%
4ml9A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 48.0 3.65e-01 99.0% 60.5%
1vjtA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 39.0 3.78e-01 74.0% 62.1%
1f6kC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 49.0 3.64e-01 100.0% 44.2%
3ijdA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.56 48.0 3.57e-01 99.0% 61.5%
3ktsA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 45.0 3.78e-01 100.0% 48.6%
3qyfA01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.56 47.0 3.97e-01 91.0% 97.6%
1ypfA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 49.0 3.57e-01 100.0% 46.8%
3oy2A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 39.0 3.08e-01 74.0% 34.5%
3cyjA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.55 48.0 3.74e-01 100.0% 54.0%
5t3oA02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 49.0 4.43e-01 100.0% 84.9%
3me8B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 39.0 3.43e-01 74.0% 50.6%
1vh7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 48.0 3.68e-01 100.0% 48.0%
2wteA01 3.40.50.11700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 43.0 3.92e-01 86.0% 97.1%
3ijlA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.55 47.0 3.68e-01 98.0% 44.7%
3elbA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 40.0 3.48e-01 80.0% 80.6%
1i5eA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 44.0 3.57e-01 92.0% 53.8%
2p4gA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.54 47.0 3.55e-01 98.0% 52.8%
3hdvB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 45.0 4.19e-01 93.0% 81.7%
3tdnA00 3.40.50.12600 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 45.0 4.25e-01 93.0% 84.3%
1s8nA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 44.0 4.07e-01 92.0% 75.8%
2w7tA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.53 45.0 3.35e-01 94.0% 85.2%
4gywA03 3.40.50.11380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 44.0 3.60e-01 95.0% 63.2%
4dqlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.52 45.0 3.88e-01 99.0% 59.6%
1u9yA02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 45.0 4.27e-01 100.0% 83.9%
4nicA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 42.0 4.06e-01 91.0% 83.8%
3c48B02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 43.0 3.63e-01 97.0% 70.5%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5027164 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.88 73.0 5.73e-01 91.0% 46.5%
5026361 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.86 74.0 5.60e-01 91.0% 41.9%
3977155 2486.1.1.19 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, SDH_protease 0.86 76.0 5.77e-01 100.0% 43.3%
3978000 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.86 76.0 5.79e-01 100.0% 44.3%
5066620 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.86 73.0 5.47e-01 94.0% 40.6%
5064223 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.85 73.0 5.49e-01 93.0% 41.4%
5032586 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.85 73.0 5.17e-01 93.0% 33.3%
4994184 2486.1.1.24 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD_membrane 0.85 71.0 4.79e-01 88.0% 27.2%
4127180 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.85 76.0 5.92e-01 100.0% 48.2%
4445600 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.85 76.0 5.73e-01 100.0% 43.7%
4936159 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.85 75.0 5.46e-01 94.0% 41.2%
4522150 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.85 79.0 5.46e-01 99.0% 39.3%
4972325 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.85 71.0 5.01e-01 88.0% 32.8%
5043511 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.85 75.0 5.38e-01 95.0% 36.5%
3602940 2486.1.1.14 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 0.84 75.0 5.52e-01 94.0% 45.1%
4616147 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.84 73.0 5.56e-01 94.0% 43.9%
3968025 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.84 74.0 5.51e-01 93.0% 40.9%
3590105 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.84 77.0 6.13e-01 100.0% 52.4%
4990878 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.84 73.0 5.54e-01 94.0% 43.3%
3958161 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.84 75.0 5.63e-01 100.0% 42.7%
1122940 2486.1.1.14 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 0.84 75.0 5.57e-01 94.0% 42.7%
5029157 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.84 75.0 5.34e-01 94.0% 38.5%
4991919 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.84 72.0 5.45e-01 92.0% 41.9%
3448952 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.84 75.0 5.75e-01 100.0% 45.9%
3385872 2486.1.1.14 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 0.84 73.0 5.19e-01 96.0% 34.1%
3970789 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.84 70.0 5.63e-01 94.0% 48.9%
4149588 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.84 75.0 5.69e-01 100.0% 44.8%
4131089 2486.1.1.14 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 0.84 74.0 5.40e-01 95.0% 38.7%
4812887 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.84 75.0 5.76e-01 100.0% 46.5%
5039057 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.84 72.0 5.28e-01 94.0% 38.3%
4934553 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.84 73.0 5.30e-01 94.0% 36.5%
4992730 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.84 73.0 5.71e-01 96.0% 47.2%
3449037 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.84 75.0 5.50e-01 100.0% 40.3%
5027704 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.83 74.0 5.35e-01 94.0% 38.8%
3303920 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.83 75.0 5.37e-01 95.0% 40.0%
4123638 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.83 74.0 5.67e-01 100.0% 44.8%
5012787 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.83 72.0 5.22e-01 92.0% 36.4%
4986604 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.83 74.0 5.35e-01 94.0% 37.6%
4932322 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.83 76.0 5.42e-01 97.0% 37.4%
5019448 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.83 73.0 5.36e-01 94.0% 39.1%
4469638 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.83 74.0 5.79e-01 99.0% 48.2%
4029606 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.83 73.0 5.50e-01 100.0% 42.3%
5042774 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.83 74.0 5.35e-01 95.0% 39.6%
4984001 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.83 74.0 5.55e-01 94.0% 43.3%
5006094 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.83 71.0 5.41e-01 92.0% 42.9%
4335500 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.83 77.0 5.70e-01 98.0% 44.8%
4489618 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.83 74.0 5.81e-01 100.0% 49.5%
4876908 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.83 74.0 5.92e-01 100.0% 52.5%
1174289 2486.1.1.14 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 0.82 74.0 5.50e-01 96.0% 44.6%
4033822 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.82 76.0 5.54e-01 100.0% 39.6%
4940652 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.82 74.0 5.13e-01 95.0% 35.2%
3575975 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.82 75.0 5.98e-01 96.0% 54.4%
4963775 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.82 72.0 5.19e-01 94.0% 38.5%
3839857 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.82 71.0 5.11e-01 95.0% 35.4%
4935462 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.82 72.0 5.29e-01 94.0% 40.8%
5043495 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.82 70.0 5.01e-01 93.0% 33.7%
5016091 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.82 74.0 5.44e-01 97.0% 42.9%
5042373 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.81 74.0 5.42e-01 98.0% 42.4%
5043980 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.81 72.0 5.56e-01 95.0% 47.0%
3968901 2486.1.1.14 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 0.80 73.0 5.06e-01 97.0% 33.4%
4259068 2486.1.1.14 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 0.80 75.0 4.52e-01 100.0% 60.0%
3273502 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.80 75.0 4.56e-01 100.0% 63.2%
3806605 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.80 74.0 5.50e-01 100.0% 50.8%
4007097 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.80 75.0 4.47e-01 100.0% 57.3%
150191 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.80 70.0 5.29e-01 94.0% 42.7%
3965266 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.79 72.0 5.08e-01 98.0% 36.1%
4082850 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.78 74.0 5.38e-01 100.0% 55.1%
3972367 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.78 71.0 5.88e-01 100.0% 58.5%
3328582 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.78 74.0 5.50e-01 100.0% 47.6%
4089356 2486.1.1.22 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › SDH_protease, NfeD1b_N 0.78 74.0 5.40e-01 100.0% 45.8%
4984269 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.78 74.0 5.21e-01 100.0% 40.7%
3604398 2486.1.1.19 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, SDH_protease 0.78 73.0 5.27e-01 100.0% 44.3%
5028365 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.77 66.0 5.13e-01 91.0% 50.7%
3165505 2486.1.1.13 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49+Peptidase_S49_N 0.77 70.0 4.76e-01 99.0% 43.8%
5071469 2486.1.1.17 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N 0.77 73.0 5.08e-01 100.0% 41.1%
4084971 2486.1.1.13 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49+Peptidase_S49_N 0.77 69.0 5.20e-01 98.0% 46.8%
4299578 2486.1.1.13 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49+Peptidase_S49_N 0.77 71.0 5.23e-01 100.0% 46.9%
3791475 2486.1.1.2 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease 0.74 69.0 5.81e-01 100.0% 98.1%
4992691 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.71 65.0 4.61e-01 98.0% 37.1%
4972926 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.70 64.0 4.62e-01 98.0% 41.1%
4976748 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.70 64.0 4.63e-01 100.0% 37.8%
3466240 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 52.0 4.20e-01 91.0% 43.7%
2755127 2006.1.6.5 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 0.65 54.0 4.09e-01 93.0% 81.1%
3220827 2006.1.6.33 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 0.65 55.0 4.39e-01 92.0% 86.7%
3228364 2006.1.6.33 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 0.63 53.0 3.50e-01 93.0% 39.5%
4330941 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.63 53.0 3.42e-01 93.0% 32.6%
4020448 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.63 52.0 4.13e-01 93.0% 78.1%
3924019 207.1.1.156 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 0.62 55.0 3.55e-01 100.0% 23.3%
3932766 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.62 53.0 4.23e-01 94.0% 81.5%
4938804 2007.3.1.0 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.60 50.0 4.59e-01 92.0% 88.0%
4968225 2007.3.1.0 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.60 50.0 4.36e-01 92.0% 87.1%
3169096 2006.1.6.4 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N 0.60 51.0 4.09e-01 93.0% 94.5%
1292974 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.58 51.0 3.73e-01 100.0% 43.4%
3399458 2003.1.6.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › DUF243 0.57 48.0 4.47e-01 92.0% 75.2%
1103034 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.57 48.0 3.65e-01 99.0% 60.5%
3970353 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.55 47.0 4.40e-01 94.0% 80.8%
3283303 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.55 46.0 4.06e-01 93.0% 89.3%
4533580 2002.1.1.97 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI 0.54 44.0 3.50e-01 91.0% 45.7%
144257 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.52 45.0 3.47e-01 99.0% 50.4%
D2 high residues 172-245
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ekqA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.75 60.0 4.45e-01 90.5% 34.2%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.66 46.0 3.77e-01 71.6% 50.4%
2qkmB01 1.10.10.1050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dcp2, box A domain 0.64 44.0 3.95e-01 71.6% 60.8%
3a1sA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 37.0 3.52e-01 97.3% 61.4%
3he0B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 39.0 3.00e-01 82.4% 94.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4876531 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.62 47.0 3.56e-01 82.4% 81.0%
3625711 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.54 41.0 2.66e-01 81.1% 48.9%
4429289 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 37.0 3.31e-01 83.8% 52.4%
3237525 101.1.1.290 alpha arrays › HTH › HTH › Three-helical HTH › PBC 0.51 46.0 3.81e-01 97.3% 59.2%
3992676 109.4.1.92 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 45.0 2.69e-01 100.0% 20.0%