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PH2015_22_scaffold_1_prodigal-single.1__X__X__00195
Bact-VirPH2015_22_scaffold_1_prodigal-single.1__X__X__00195
Identity
- Kingdom:
- phage
Quality
70.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-92
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vseA04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.66 | 53.0 | 4.00e-01 | 88.1% | 67.8% |
| 3ef2A02 | 3.30.460.70 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.65 | 51.0 | 3.95e-01 | 88.1% | 74.6% |
| 1lmlA04 | 2.30.34.10 | Mainly Beta › Roll › Leishmanolysin; domain 4 › Leishmanolysin domain 4 | 0.64 | 52.0 | 4.49e-01 | 94.9% | 75.8% |
| 2vseA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.64 | 50.0 | 3.84e-01 | 88.1% | 71.8% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 55.0 | 4.81e-01 | 100.0% | 91.3% |
| 1qxmA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.63 | 52.0 | 3.93e-01 | 91.5% | 66.9% |
| 1sr4A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.63 | 50.0 | 3.59e-01 | 86.4% | 53.9% |
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.62 | 48.0 | 4.79e-01 | 89.8% | 85.7% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.62 | 53.0 | 3.71e-01 | 100.0% | 56.8% |
| 7kcgA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.61 | 48.0 | 3.72e-01 | 86.4% | 67.7% |
| 2b5uA03 | 3.10.380.10 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain | 0.61 | 47.0 | 3.96e-01 | 89.8% | 50.0% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 49.0 | 3.95e-01 | 94.9% | 74.2% |
| 2dg1C00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 52.0 | 3.27e-01 | 100.0% | 30.9% |
| 4zk3A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.59 | 48.0 | 3.85e-01 | 100.0% | 43.3% |
| 4chmB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 48.0 | 3.93e-01 | 96.6% | 83.1% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 42.0 | 4.10e-01 | 79.7% | 74.2% |
| 3ihpA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 48.0 | 3.98e-01 | 98.3% | 65.5% |
| 7qs4A01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.58 | 50.0 | 3.59e-01 | 100.0% | 58.7% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 51.0 | 3.18e-01 | 100.0% | 31.6% |
| 2kdsA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 42.0 | 3.83e-01 | 84.7% | 57.0% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 3.81e-01 | 88.1% | 61.6% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 41.0 | 4.20e-01 | 86.4% | 83.9% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 41.0 | 4.31e-01 | 84.7% | 90.6% |
| 7qryB01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.56 | 48.0 | 3.62e-01 | 100.0% | 64.7% |
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 44.0 | 3.49e-01 | 89.8% | 71.4% |
| 6gpkA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.56 | 38.0 | 3.10e-01 | 76.3% | 38.5% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 43.0 | 4.36e-01 | 84.7% | 98.3% |
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.55 | 43.0 | 3.57e-01 | 91.5% | 88.4% |
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.55 | 46.0 | 3.62e-01 | 100.0% | 76.6% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 42.0 | 3.98e-01 | 86.4% | 77.3% |
| 3arxA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.55 | 37.0 | 3.29e-01 | 71.2% | 79.1% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 45.0 | 3.93e-01 | 98.3% | 92.0% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 3.32e-01 | 88.1% | 45.0% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 3.64e-01 | 86.4% | 58.7% |
| 1n7oA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.54 | 41.0 | 3.68e-01 | 83.1% | 65.9% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 44.0 | 2.97e-01 | 100.0% | 34.2% |
| 6y48D01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 2.66e-01 | 89.8% | 73.8% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 39.0 | 3.02e-01 | 86.4% | 87.9% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 39.0 | 3.76e-01 | 84.7% | 80.9% |
| 3h6zA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 40.0 | 3.43e-01 | 94.9% | 89.3% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 38.0 | 3.80e-01 | 83.1% | 90.0% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 40.0 | 3.72e-01 | 93.2% | 88.0% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3379478 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.69 | 46.0 | 5.04e-01 | 79.7% | 91.1% |
| 3328891 | 4.1.1.296 ↗ | beta barrels › SH3 › SH3 › SH3 › TDBD | 0.67 | 55.0 | 5.35e-01 | 91.5% | 96.9% |
| 3438927 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.67 | 51.0 | 5.11e-01 | 81.4% | 100.0% |
| 5069874 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.65 | 52.0 | 3.83e-01 | 100.0% | 34.0% |
| 3646521 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.64 | 54.0 | 5.01e-01 | 94.9% | 93.3% |
| 5077640 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 48.0 | 4.94e-01 | 81.4% | 98.2% |
| 3701496 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 44.0 | 4.81e-01 | 89.8% | 97.8% |
| 4927636 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 41.0 | 4.62e-01 | 83.1% | 100.0% |
| 3702275 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.61 | 43.0 | 4.44e-01 | 74.6% | 81.8% |
| 3719349 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 48.0 | 2.91e-01 | 88.1% | 30.4% |
| 3359784 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.61 | 44.0 | 4.29e-01 | 86.4% | 70.8% |
| 3276072 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.60 | 53.0 | 4.39e-01 | 100.0% | 80.0% |
| 3828657 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 47.0 | 4.02e-01 | 88.1% | 77.0% |
| 3515495 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 44.0 | 3.81e-01 | 84.7% | 49.5% |
| 3631132 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.60 | 52.0 | 3.19e-01 | 100.0% | 19.7% |
| 3256498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 43.0 | 4.46e-01 | 84.7% | 83.6% |
| 3935130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 45.0 | 4.69e-01 | 88.1% | 89.1% |
| 3188732 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 45.0 | 4.21e-01 | 83.1% | 74.7% |
| 3292855 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.59 | 50.0 | 4.03e-01 | 98.3% | 76.8% |
| 4940485 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 50.0 | 4.03e-01 | 100.0% | 93.6% |
| 3828348 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 43.0 | 4.19e-01 | 81.4% | 72.3% |
| 5025461 | 3347.1.1.0 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 | 0.58 | 42.0 | 3.88e-01 | 76.3% | 68.0% |
| 3947081 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.58 | 46.0 | 4.50e-01 | 91.5% | 79.7% |
| 3477236 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.58 | 51.0 | 2.81e-01 | 98.3% | 17.9% |
| 3669492 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 42.0 | 3.28e-01 | 86.4% | 33.6% |
| 5038362 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.58 | 42.0 | 4.25e-01 | 96.6% | 80.0% |
| 3501699 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 43.0 | 3.95e-01 | 86.4% | 60.0% |
| 3389062 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 46.0 | 4.03e-01 | 98.3% | 95.2% |
| 3194043 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 50.0 | 2.97e-01 | 100.0% | 44.0% |
| 4948153 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 41.0 | 3.94e-01 | 88.1% | 65.7% |
| 3640359 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 48.0 | 2.91e-01 | 100.0% | 43.8% |
| 3186413 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.57 | 49.0 | 2.86e-01 | 100.0% | 22.0% |
| 4497181 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.57 | 43.0 | 3.21e-01 | 98.3% | 30.3% |
| 3593875 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 38.0 | 3.97e-01 | 84.7% | 76.4% |
| 5047657 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 38.0 | 3.93e-01 | 89.8% | 76.4% |
| 5014686 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.56 | 38.0 | 3.91e-01 | 96.6% | 74.5% |
| 3635329 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 43.0 | 3.10e-01 | 88.1% | 51.0% |
| 3702861 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.56 | 38.0 | 3.93e-01 | 84.7% | 76.4% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.56 | 40.0 | 3.98e-01 | 86.4% | 72.3% |
| 3204169 | 6043.1.1.4 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 | 0.56 | 38.0 | 3.68e-01 | 72.9% | 82.9% |
| 4028185 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.56 | 39.0 | 4.11e-01 | 91.5% | 88.0% |
| 3547089 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 40.0 | 3.54e-01 | 88.1% | 51.1% |
| 3453930 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 46.0 | 2.97e-01 | 93.2% | 30.9% |
| 3546762 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.55 | 43.0 | 4.12e-01 | 86.4% | 84.3% |
| 1122902 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.55 | 39.0 | 4.06e-01 | 78.0% | 100.0% |
| 3638396 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.55 | 43.0 | 4.30e-01 | 86.4% | 91.7% |
| 3879068 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 39.0 | 3.56e-01 | 83.1% | 54.1% |
| 3368126 | 5.1.5.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 | 0.54 | 46.0 | 3.08e-01 | 100.0% | 29.0% |
| 3401066 | 5.1.3.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP | 0.54 | 47.0 | 2.86e-01 | 100.0% | 31.5% |
| 4962603 | 4.26.1.9 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › CPxCG_zf | 0.54 | 38.0 | 4.14e-01 | 91.5% | 100.0% |
| 4222495 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.54 | 45.0 | 3.74e-01 | 98.3% | 64.3% |
| 3189994 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.54 | 36.0 | 3.20e-01 | 89.8% | 45.6% |
| 3407853 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 37.0 | 3.34e-01 | 86.4% | 50.0% |
| 3274551 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 38.0 | 3.63e-01 | 86.4% | 62.7% |
| 4997629 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.53 | 37.0 | 2.61e-01 | 72.9% | 70.3% |
| 5041833 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 38.0 | 3.68e-01 | 96.6% | 67.6% |
| 3407820 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 37.0 | 3.38e-01 | 86.4% | 52.9% |
| 3941320 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.53 | 42.0 | 3.97e-01 | 100.0% | 72.0% |
| 2569205 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 45.0 | 2.78e-01 | 100.0% | 22.3% |
| 4672378 | 71.1.1.1 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin | 0.52 | 44.0 | 3.20e-01 | 100.0% | 71.9% |
| 424930 | 5.1.3.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP | 0.52 | 45.0 | 2.80e-01 | 100.0% | 33.1% |
| 3606287 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 2.70e-01 | 98.3% | 24.3% |
| 3208203 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.51 | 34.0 | 3.50e-01 | 84.7% | 74.5% |
| 3888040 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 35.0 | 3.34e-01 | 74.6% | 61.4% |