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PH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00113
Bact-VirPH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00113
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-38_86-222
Domain cluster:
rep: PH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00164__D55-232
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03473.24 best | MOSC | 36.4 | 6.90e-09 | 73.7% | 80.0% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oruA00 | 2.40.33.20 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.80 | 71.0 | 7.09e-01 | 92.0% | 100.0% |
| 5yhhA00 | 2.40.33.20 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.74 | 67.0 | 6.40e-01 | 93.1% | 90.3% |
| 1o67C00 | 2.40.33.20 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.70 | 63.0 | 5.93e-01 | 95.4% | 84.8% |
| 4b43A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 32.0 | 3.90e-01 | 90.9% | 75.7% |
| 3no8A00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.58 | 32.0 | 3.44e-01 | 97.7% | 60.5% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 22.0 | 3.40e-01 | 91.4% | 92.9% |
| 1dtdB00 | 3.30.1040.10 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › Carboxypeptidase inhibitor | 0.53 | 21.0 | 3.18e-01 | 75.4% | 95.1% |
| 3ccfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 42.0 | 3.84e-01 | 86.3% | 99.6% |
| 3hnmA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 30.0 | 3.13e-01 | 97.1% | 59.9% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 33.0 | 3.67e-01 | 84.0% | 84.4% |
| 3dlqR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 25.0 | 3.25e-01 | 93.1% | 83.0% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3200577 | 1.1.15.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC | 0.80 | 71.0 | 6.82e-01 | 92.0% | 100.0% |
| 3971647 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.80 | 64.0 | 7.07e-01 | 88.6% | 100.0% |
| 4965077 | 4161.1.1.2 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N | 0.79 | 68.0 | 5.83e-01 | 89.7% | 100.0% |
| 4966956 | 1.1.15.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC | 0.78 | 63.0 | 7.00e-01 | 86.9% | 100.0% |
| 3408265 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.78 | 66.0 | 5.42e-01 | 88.6% | 99.7% |
| 4965314 | 1.1.15.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC | 0.77 | 68.0 | 7.08e-01 | 91.4% | 97.0% |
| 2439620 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.77 | 66.0 | 4.75e-01 | 88.6% | 100.0% |
| 3924385 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.76 | 67.0 | 5.40e-01 | 90.9% | 100.0% |
| 4429302 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.76 | 65.0 | 5.38e-01 | 89.1% | 98.6% |
| 3935555 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.76 | 69.0 | 5.86e-01 | 94.9% | 100.0% |
| 3954113 | 1.1.15.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC | 0.76 | 68.0 | 6.22e-01 | 93.1% | 91.8% |
| 3385988 | 1.1.15.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC | 0.76 | 67.0 | 6.22e-01 | 92.6% | 88.8% |
| 4943872 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.76 | 59.0 | 6.63e-01 | 85.7% | 100.0% |
| 3961100 | 1.1.15.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC | 0.76 | 56.0 | 6.04e-01 | 77.7% | 88.0% |
| 3721100 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.75 | 69.0 | 5.51e-01 | 95.4% | 99.0% |
| 3282994 | 1.1.15.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC | 0.75 | 67.0 | 6.22e-01 | 93.1% | 85.1% |
| 3228787 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.75 | 69.0 | 5.57e-01 | 96.0% | 100.0% |
| 2163960 | 1.1.15.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC,YiiM_3-alpha | 0.74 | 67.0 | 6.40e-01 | 93.1% | 90.3% |
| 3185963 | 1.1.15.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC,YiiM_3-alpha | 0.74 | 67.0 | 5.92e-01 | 95.4% | 87.8% |
| 4033559 | 1.1.15.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC,YiiM_3-alpha | 0.72 | 64.0 | 5.94e-01 | 93.1% | 90.2% |
| 4204869 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.64 | 33.0 | 4.19e-01 | 90.9% | 82.9% |
| 4620059 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.63 | 35.0 | 4.26e-01 | 90.3% | 82.6% |
| 4619296 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.62 | 32.0 | 3.78e-01 | 90.9% | 69.6% |
| 4886574 | 2004.1.1.923 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › EF-G_D2 | 0.61 | 32.0 | 3.77e-01 | 90.9% | 69.6% |
| 3667743 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.61 | 32.0 | 3.70e-01 | 90.9% | 66.9% |
| 4138633 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.61 | 32.0 | 3.96e-01 | 90.9% | 79.1% |
| 3632026 | 2003.1.5.153 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT, Methyltransf_25 | 0.60 | 44.0 | 3.83e-01 | 74.9% | 87.5% |
| 3203573 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.60 | 44.0 | 3.78e-01 | 74.9% | 84.2% |
| None | — | 0.60 | 32.0 | 2.93e-01 | 91.4% | 38.3% | |
| 4203595 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.59 | 32.0 | 3.61e-01 | 91.4% | 67.7% |
| 3622545 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.54 | 32.0 | 3.39e-01 | 96.0% | 63.1% |
| 1066946 | 11.1.5.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_3 | 0.52 | 33.0 | 3.41e-01 | 97.1% | 64.1% |
| 3580968 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.52 | 31.0 | 3.24e-01 | 96.6% | 61.2% |
| 3596421 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 25.0 | 3.00e-01 | 86.3% | 66.7% |
D2
medium
residues 39-85_223-262