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PH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00290

Bact-Vir

PH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00290

Identity

Kingdom:
phage

Quality

75.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-57
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vhnA02 1.10.1200.80 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 0.63 56.0 5.01e-01 96.2% 73.2%
1ynjJ01 1.10.1790.20 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › 0.63 50.0 3.92e-01 88.7% 42.2%
4om8A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.61 51.0 3.92e-01 94.3% 92.7%
1orqC01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 45.0 3.05e-01 92.5% 22.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3708001 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.89 64.0 5.77e-01 88.7% 57.1%
3848085 3736.1.1.1 ↗ alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4_HD2 0.68 57.0 4.73e-01 100.0% 93.3%
3407920 101.1.2.73 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 0.58 49.0 4.02e-01 96.2% 64.0%
4967531 2003.1.5.41 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RMNT_CmcI 0.56 44.0 2.93e-01 92.5% 32.8%