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PH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00310

Bact-Vir

PH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00310

Identity

Kingdom:
phage

Quality

91.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-294
PDB
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1m1zA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.71 57.0 5.90e-01 88.0% 87.4%
1q15D02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 54.0 5.66e-01 88.0% 85.4%
3n05A02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 45.0 5.55e-01 81.5% 98.4%
1ct9B02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 61.0 6.08e-01 90.1% 95.3%
2wsiA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 45.0 4.57e-01 84.9% 66.3%
1xngA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 49.0 5.31e-01 92.5% 85.0%
1zunA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 44.0 5.41e-01 82.2% 99.0%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 48.0 5.15e-01 93.2% 82.0%
2vxoA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 48.0 5.52e-01 84.6% 98.2%
1surA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 46.0 5.29e-01 90.1% 94.9%
3k32B00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 41.0 4.90e-01 80.5% 92.9%
3vrhA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 49.0 4.91e-01 93.8% 76.5%
2derB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 43.0 5.07e-01 80.1% 99.0%
3nd5A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 33.0 4.42e-01 74.3% 96.1%
4zeoH02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.62 35.0 4.61e-01 92.8% 98.8%
3tm4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 34.0 4.26e-01 72.6% 86.3%
2f9fA00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 29.0 3.72e-01 71.6% 77.7%
1gcuA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 26.0 3.67e-01 71.6% 83.3%
1kqpA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 48.0 5.04e-01 94.2% 91.9%
1vb5B02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.58 37.0 4.56e-01 91.8% 100.0%
3imkA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 30.0 4.02e-01 73.6% 93.0%
4krgA02 3.40.50.12180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 36.0 4.23e-01 90.8% 88.8%
3ecsD02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.56 38.0 4.51e-01 92.8% 99.0%
2py6A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 35.0 4.31e-01 91.4% 97.2%
1pujA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 31.0 4.15e-01 76.0% 100.0%
3a11B02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.56 38.0 4.52e-01 92.8% 100.0%
2l82A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 28.0 3.72e-01 70.9% 85.8%
2pg3A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 40.0 4.59e-01 86.3% 98.2%
4rv9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 34.0 3.98e-01 92.5% 86.6%
3h05B00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 31.0 4.07e-01 76.4% 98.2%
4lg1B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 32.0 3.73e-01 72.9% 78.4%
3ilvA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 48.0 4.62e-01 93.2% 93.6%
2a9sB00 3.90.950.20 Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like 0.53 29.0 3.70e-01 75.7% 89.7%
2g07A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 33.0 4.02e-01 80.5% 95.7%
2iuyA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 28.0 3.53e-01 84.6% 84.1%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3604348 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.80 48.0 6.17e-01 86.0% 98.9%
4952835 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.80 47.0 6.14e-01 82.9% 100.0%
4989452 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.79 46.0 6.07e-01 85.3% 100.0%
5058048 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.79 34.0 4.90e-01 75.0% 84.3%
4838655 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.78 46.0 6.05e-01 83.6% 100.0%
4940246 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.78 46.0 5.94e-01 82.9% 97.1%
4948508 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.78 44.0 5.90e-01 79.1% 100.0%
4945173 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.78 49.0 6.12e-01 89.7% 98.4%
4999088 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.78 48.0 5.80e-01 84.6% 90.8%
4950959 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.76 47.0 6.01e-01 83.2% 100.0%
None 0.74 46.0 5.81e-01 81.2% 98.4%
5081219 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.74 58.0 6.33e-01 85.3% 95.5%
4928871 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.73 60.0 6.51e-01 86.6% 100.0%
5054884 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.73 60.0 6.50e-01 91.4% 100.0%
5055577 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.73 62.0 5.75e-01 87.7% 93.8%
5032273 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.73 62.0 6.34e-01 87.7% 93.9%
3287133 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.72 63.0 5.53e-01 90.4% 96.6%
3960595 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.72 62.0 5.69e-01 87.7% 94.7%
4968614 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.72 58.0 6.37e-01 86.6% 98.8%
5015697 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.72 45.0 5.36e-01 84.2% 89.5%
4870619 2003.1.7.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B 0.72 29.0 4.12e-01 83.9% 75.7%
4940516 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.72 60.0 6.42e-01 87.3% 98.0%
5057523 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.72 61.0 5.35e-01 87.7% 92.5%
4930540 2005.1.1.14 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.71 49.0 5.66e-01 88.4% 93.0%
5038392 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 58.0 6.21e-01 89.0% 96.8%
1309317 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.71 34.0 5.02e-01 91.1% 99.3%
4977476 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 60.0 6.23e-01 87.3% 96.4%
3233267 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.71 64.0 6.17e-01 93.2% 99.4%
4214089 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.71 63.0 5.71e-01 92.5% 94.2%
5018426 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.71 62.0 6.20e-01 90.4% 94.9%
5029050 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.71 62.0 6.46e-01 90.4% 100.0%
4967200 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.70 60.0 6.05e-01 87.7% 94.8%
3956153 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.70 62.0 5.83e-01 90.8% 95.9%
None 0.70 48.0 5.76e-01 83.6% 100.0%
5074632 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.70 61.0 6.11e-01 89.7% 96.3%
4994022 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.70 61.0 5.98e-01 89.7% 91.9%
5044108 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.70 59.0 6.13e-01 87.7% 96.4%
4949619 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.70 61.0 5.59e-01 90.8% 94.3%
4983429 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.70 60.0 6.23e-01 89.4% 100.0%
4406429 2005.1.1.8 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth 0.69 42.0 5.39e-01 76.0% 100.0%
4991336 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.69 60.0 6.04e-01 89.7% 96.9%
5022266 2005.1.1.14 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.69 45.0 5.57e-01 82.5% 100.0%
5001505 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.69 61.0 6.33e-01 90.8% 99.3%
5023424 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.69 45.0 5.11e-01 86.6% 85.0%
4943110 2005.1.1.111 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › GMP_synt_C 0.69 47.0 5.61e-01 83.6% 99.5%
5074926 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.69 50.0 5.77e-01 88.7% 99.1%
4928833 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.69 61.0 5.95e-01 92.5% 90.9%
5016070 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.69 60.0 5.58e-01 90.1% 97.5%
5014627 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.69 47.0 5.49e-01 85.3% 95.2%
5065072 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.69 60.0 5.90e-01 90.4% 92.9%
5046642 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.68 59.0 5.93e-01 89.4% 89.5%
5012450 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.68 48.0 5.28e-01 94.2% 87.2%
4932416 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.68 59.0 6.06e-01 89.0% 96.4%
None 0.68 49.0 5.23e-01 92.8% 82.3%
None 0.68 48.0 5.17e-01 93.2% 82.4%
4486353 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.67 47.0 5.35e-01 93.2% 92.3%
4396909 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.67 49.0 5.44e-01 93.5% 93.0%
9839 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.67 58.0 5.84e-01 91.4% 89.7%
5053982 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.66 51.0 5.33e-01 93.2% 84.8%
9840 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.66 56.0 5.70e-01 91.1% 89.9%
4305205 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.66 58.0 5.83e-01 91.1% 96.6%
5069002 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.66 50.0 5.21e-01 93.2% 83.3%
4308342 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.65 41.0 4.86e-01 78.8% 87.1%
None 0.65 48.0 5.34e-01 92.5% 93.9%
None 0.65 49.0 5.37e-01 93.2% 91.8%
133894 2005.1.1.47 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans 0.65 49.0 5.41e-01 90.1% 94.1%
4536847 2005.1.1.23 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.65 46.0 5.28e-01 83.9% 96.3%
4487256 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.65 46.0 5.27e-01 92.1% 96.3%
5039281 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.65 41.0 4.81e-01 78.4% 88.8%
4005131 2005.1.1.14 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.63 48.0 5.29e-01 94.9% 94.2%
4045263 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.63 49.0 5.25e-01 90.1% 92.0%
4027081 2005.1.1.23 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.63 45.0 5.11e-01 81.8% 93.8%
5082742 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.62 51.0 5.31e-01 88.4% 90.7%
4072992 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.62 49.0 5.10e-01 90.1% 86.5%
4664976 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.62 49.0 5.31e-01 90.1% 96.3%
4644409 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.61 50.0 5.24e-01 90.8% 92.4%
None 0.61 41.0 4.73e-01 80.1% 90.7%
None 0.60 41.0 4.53e-01 80.1% 83.7%
5044019 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.59 47.0 5.07e-01 94.5% 94.1%
5080574 2005.1.1.108 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF30497 0.59 54.0 5.11e-01 97.9% 80.9%
4483631 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.59 49.0 5.06e-01 92.8% 89.3%
5048259 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.59 47.0 5.00e-01 94.5% 92.9%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.59 49.0 5.08e-01 90.4% 91.2%
5026578 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.59 47.0 5.00e-01 94.9% 94.1%
3789499 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.59 49.0 5.16e-01 92.8% 96.2%
4061833 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.59 49.0 5.02e-01 92.1% 89.1%
5071227 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.58 49.0 4.87e-01 92.8% 84.0%
3973558 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.58 53.0 4.89e-01 97.3% 75.9%
5029545 2005.1.1.108 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF30497 0.57 50.0 4.83e-01 96.6% 83.4%
4044658 2003.1.1.76 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SDH_C 0.57 36.0 4.45e-01 92.8% 100.0%
4070508 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.56 49.0 4.95e-01 94.2% 92.3%
5014269 2005.1.1.14 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.56 48.0 4.70e-01 89.4% 91.7%
5004524 2005.1.1.23 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.55 50.0 4.91e-01 95.2% 91.0%
3788813 2003.1.7.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B 0.54 38.0 4.41e-01 92.5% 98.5%
3724291 2003.1.7.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B 0.50 39.0 4.33e-01 92.8% 100.0%